| Acc. |
CA990772 |
| Internal Acc. |
EST644280 |
| Type |
EST
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana E-value=4e-56; E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana E-value=2e-55; E3 ubiquitin-protein ligase ptr1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=6e-44; E3 ubiquitin-protein ligase TOM1-like OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) E-value=2e-42; E3 ubiquitin-protein ligase HUWE1 (Fragment) OS=Rattus norvegicus E-value=3e-41; |
| Length |
541 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_GESD; |
| Sequence |
AGCTTGAATTATTGATCAGTGGGCTTCCTGATATTGATTTGGATGACTTGAGAGCAAATA
CAGAATATTCTGGATATAGTGCTGCATCGCCAGTTATTCAATGGTTTTGGGAGGTTGTTC
AAGGCTTAAGCAAAGAAGACAAGGCTCGCCTTTTGCAATTTGTAACTGGCACATCCAAGG
TGCCTTTGGAAGGTTTTAGTGCTCTTCAAGGAATTTCAGGCTCCCAGAAATTTCAGATAC
ATAAAGCATATGGAAGTCCTGATCACTTGCCTTCTGCTCATACTTGTTTCAATCAATTGG
ATTTGCCGGAGTATCCATCTAAACAACATTTGGAAGAAAGGTTACTGCTAGCGATTCATG
AAGCAAGCGAGGGATTTGGATTTGGTTAAGATTTGTATTTGTATTACATTTTATTTAGAT
TAGGAGTTTATTTCAGAATAGAATTGAGTGGTACAGGGGTTTGAATATTTTTTAAATATC
TTGTCTATATGTTGTACAGTAGTATCTTCGCAATAGAAAATGTCCCTTTTGGCAGTTTTT
C
|
| EST members of Unigene |
N/A
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10592 E3 ubiquitin-protein ligase HUWE1 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
8.A.3 Cytoplasmic membrane-periplasmic auxiliary-1 protein MPA1 plus a cytoplasmic domain MPA1-C or MPA1+C |
| Probeset |
|
| Corresponding NCBI Gene |
842036
|
| Trichome-related Gene from Literature |
842036
|