| Acc. |
FG181129 |
| Internal Acc. |
AGN_PNL203cr1_a6.trimmed.seq |
| Type |
EST
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana E-value=6e-23; E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana E-value=6e-22; E3 ubiquitin-protein ligase ptr1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=4e-15; E3 ubiquitin-protein ligase HUWE1 (Fragment) OS=Rattus norvegicus E-value=1e-12; E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus E-value=1e-12; |
| Length |
678 nt |
| Species |
Nicotiana tabacum |
| Belonged EST Libraries |
NT_AGN_PNL; |
| Sequence |
CATTATAAGCTGATTAAAGTGTTGATCTGATGCCAACCGGTAACCATAGGTAATTAATCA
AATTCTAAAGCATGAATGAATTAGCACCTACCCCAGACCCAAAATAAATGTAGACCTCCC
ACACCGAGTCCCCTTCCAAACAGAAAATGGAAAATGAAATATGTTACTTATCTACACAGG
GACCGAACTTTGTTGGAGTGACTTCTGAATCTGTTGGAATGGAAGGAACAACAAAATCGG
AGCTCCTCGCCACTGTGCAAGAAGATTACCACTCGTAATGCATAACCCCCTACCTGAAGA
TACTAAACTGCCATGTACATGACCGAAGCATAGCAATTACCCAGTCATCCTTCCATCATC
CTTAAGATAGGCTGTATATAGACTCAAATCTGTAAGCAACACACTCCCAATCTGTGTTGT
TCAGTTGATGTCGATCAGCCAGTATTTACATGGAAATCACAGGATGATCAAATATAAGCA
ATTTTCGGGGAAGCTGCAAAAGGGAAGCTTGTCTCAACCAAAACCAAATCCTTCACTAGC
CTCATGGATAGCCAAAAGCAAACGTTCTTGAAGCTGTTCCTTGGAAGTATACTCCGGTAG
GTCAAGTTGGTTGAAGCAGGTATGTGCAGATGGAAGCCGCTCAGGAGCTCCATAAGCCTT
GTGAATCTGAAATCTCTG
|
| EST members of Unigene |
N/A
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10592 E3 ubiquitin-protein ligase HUWE1 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
8.A.3 Cytoplasmic membrane-periplasmic auxiliary-1 protein MPA1 plus a cytoplasmic domain MPA1-C or MPA1+C |
| Probeset |
|
| Corresponding NCBI Gene |
842036
|
| Trichome-related Gene from Literature |
842036
|