| Acc. |
GT170909 |
| Internal Acc. |
LH__Ea0011J23.r |
| Type |
EST
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana E-value=3e-61; Ubiquitin-protein ligase E3C OS=Homo sapiens E-value=1e-30; Ubiquitin-protein ligase E3C OS=Mus musculus E-value=2e-30; E3 ubiquitin-protein ligase UPL7 OS=Arabidopsis thaliana E-value=1e-29; Probable E3 ubiquitin-protein ligase HUL5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) E-value=2e-27; |
| Length |
1040 nt |
| Species |
Solanum habrochaites |
| Belonged EST Libraries |
LIBEST_025268; |
| Sequence |
GAGGGTACTGTGCAAGCTAACCGTTCAAGGATATTACAACTAGCTGCAGTTGGGCACCTC
GTGAGAGATGCATAAACTTGTACAATGAATACAAATGGTTGACAACTTCCGGTGACTATG
ATCATCCTAATATATAAGCTTCCACAAGTTTCAAAATAATTCTTAACTACACACTCGTTT
TCAACGAGTTTGAAATGTCTAGCACGCGTGCCATTCACTTCCCAAAGGATGATATACAGT
GCACCTGGGGTATGTATGCACATCTAGTCAAAAGGTAGGTAATGGGGTTCTTATTTACAC
GTGCTTCTTGACCATCTATCGACTGTGGAGCAATTAGCAGTTCCTTTCCAGTATGATCCA
TGGTGGTGCACAGATCATACCATTTCATGTGTTTTTCTTTATGCCAATGAAGAACACAAG
CTGCTTCAGATAAAAAGCGGACACTCCAAAATTGCATGCACAGATAATTCCATCAGCTTA
AATCAAAACCAGCATCAGCATTTATGGCGTATAACAATTTCTGCTCCATCTGCTCTTTGC
TTCTGTATGGTGGAAATTTTAAAAGATTCATGCAAGTAGCTGATGTCGGCAGACGATCAA
GAGCTTCATCAGAAGCATGCCCACCCGCTCTCTGTATGCAGAACAACGGCTCCAAATATT
TAAATCCGAGTAAGGGTCCTCGTGAGCACCCAGTCACAAACTTCAGAAATTTTCTCTGAT
TTTCCAAAGAAAAGTTTTTCACAACCTCCCAAAACGTATCAATAACATAGTGTTCCTTGT
GGTAACCTCCTGTATAATTGGTATGAGCTCGAAGGTCATCAATATCAATGCCATCAAGTG
ATCCAGAATAAGAAGCTGAAGTTCATGTTCATTAAACATGTCCATCCACTCCTTTTGAAT
TAGCTGTTGGAAACCCCTAGAAAATGAAAACTTTTGTGAAGGATCTGAAAAGTTTAACAA
TGGTTAACACCAAAATGAATAAAGGTGATGACATTTCTCTTTAATAACCCCTTGTGGTTT
TACCAACAGAAAGCAACTCC
|
| EST members of Unigene |
N/A
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10589 ubiquitin-protein ligase E3 C |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
8.A.3 Cytoplasmic membrane-periplasmic auxiliary-1 protein MPA1 plus a cytoplasmic domain MPA1-C or MPA1+C |
| Probeset |
|
| Corresponding NCBI Gene |
820979
|
| Trichome-related Gene from Literature |
820979
|