| Acc. |
TCCS20051 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, chloroplastic OS=Arabidopsis thaliana E-value=0; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica E-value=0; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Protochlamydia amoebophila (strain UWE25) E-value=0; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) E-value=0; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) E-value=0; |
| Length |
2642 nt |
| Species |
Cannabis sativa |
| Belonged EST Libraries |
LIBEST_027499 (35 ESTs); |
| Sequence |
AATTCTTTCTCAAAAACTCTTTCTTTCTTTCTTTCTTTCTTTCTCTTTCTCTTTCTCTCT
CTAGGATCATCACCACCAGTTTCCCTCTCCTCCAGAGGCTTCTGGGTCGCTTTTAAAGGG
CTTTTTCAATCTGAATATTTGATTTTCAGGTGAGCTTTTGAGTTTGTGGAAATGGCTTCT
GGAGCTGTACCAGCATCAATTTCATATCTGAAAAGCAGAGACTCTGGCTTGAGCTTTGCT
AAAAGTTCTGATTTTGTGAGGCTTTCTGATTTAAAGAGGGTTGGTTCATCTAGAACAAGA
GTTTCAATTATCCGAAATTCGAATCCTGGTTCAGATATTGCTGAACTTCAGCCTGCATCA
AAAGGAAGCCCTCTATTAGTTCCTAGACAGAAATACTGTGAGTCCTTACACAAAACTGTT
AGGAGGAAAACGCGAACTGTGATGGTGGGAAATGTTGCTCTTGGCAGTGAGCATCCCATA
AGAATTCAAACGATGACGACAAATGATACCAAGGATGTTGCTGGAACAGTTGAAGAGGTG
ATGAGAATAGCTGATAAGGGAGCTGATATTGTTCGGATAACAGTTCAGGGAAGAAAAGAA
GCAGATGCTTGTTTCGAAATAAAAAATTCACTTGTGCAGAAGAATTATAATATACCTCTT
GTGGCAGATATTCATTTTGCTCCCCCAGTTGCATTAAGAGTTGCTGAATGCTTCGATAAA
ATTCGTGTCAATCCTGGAAATTTCGCTGACAGACGGGCTCAGTTTGAGACGCTTGAGTAC
ACAGACGACGACTATCAGAAAGAACTTGAGCATATTGAGCAGGTTTTTTCTCCATTGGTT
GAGAAATGTAAGAAATATGGTAGAGCAATGCGTATCGGGACAAATCATGGGAGTCTTTCA
GATCGTATCATGAGCTACTATGGAGATTCTCCTAGGGGAATGGTTGAATCTGCATTTGAG
TTTGCAAGGATTTGCCGGAAGTTGGATTTCCATAATTTTGTGTTTTCGATGAAAGCAAGC
AACCCAGTTGTCATGGTTCAGGCGTATCGTCTACTTGTTGCTGAAATGTATGTCCAGGGC
TGGGACTATCCACTTCACTTGGGAGTTACTGAAGCGGGAGAAGGTGAGGATGGACGAATG
AAATCTGCAATTGGCATCGGGACCCTTCTTCAGGATGGTTTGGGTGATACTATCAGGGTT
TCACTCACTGAACCGCCCGAGGAGGAAATTGATCCCTGCAGAAGGTTGGCCAATTTGGGT
ACAAAAGCAGCTGATCTTCAGCAAGGAGTGGCTCCATTTGAAGAGAAACACAGGCATTAT
TTTGATTTTCAACGACGAACTGGTCAACTGCCTCTACAGAAGGAGGGCGATGAGGTTGAC
TATAGAGGTGCTCTGCACCGTGATGGTTCGGTTCTCATGTCAGTGTCTCTCAATAACTTA
AAGATGCCCGAGCTCCTATACAGATCACTAGCAGCAAAGCTTGTCGTCGGGATGCCATTT
AAGGATCTGGCAACAGTAGACTCCATCTTATTGAGACAACTTCCACCTATTAACGATGAC
AACGCTCGATTAGCTCTCAAAAGATTGATAGACATAAGTATGGGGGTCATAACTCCTTTG
TCGGAGCAGCTAACAAAGCCATTGCCAAATGCTATGGTTTTGGTAAATCTTAAGGAGTTA
TCATCTGGTGCACACAAGCTTTTGCCAGAAGGCACGCGTTTGGTTGTATCCTTGCGCGGT
GATGAACCTTACGAAGAACTGGAGATTCTCAAAGGGGTTGATGATGTTGTTATGATTCTT
CATGATCTTCCGTTCGATGAACATAAAATTAGCAGAGTCCACTCAGCAAGAAGGTTATTT
GAGTATCTATCAGATAATTCTCTTAACTTTCCTGTAATACACCACATTCAATTTCCAAAT
GGAATCCACAGGGATGACTTAGTCATCGGTGCAGGTAGCAACGCTGGTGCCCTTTTAGTA
GATGGACTCGGGGACGGTATCCTCTTAGAAGCCCCAGATCAGGATTTCGATTTTCTCAGA
AATACTTCTTTCAACCTACTTCAAGGTTGTAGAATGCGAAATACAAAGACGGAGTATGTC
TCGTGCCCATCCTGCGGTAGAACTTTGTTTGACCTTCAAGAAATTAGTGCAGAGATTCGA
GAGAAGACATCACACCTGCCCGGTGTCTCAATTGCAATCATGGGTTGCATTGTTAATGGA
CCCGGAGAGATGGCTGATGCAGACTTCGGTTATGTCGGTGGTGCTCCCGGAAAGATTGAC
CTTTACGTTGGAAAGACGGTAGTGCAGCGTGGAATCGCAATGGAACAAGCAACCGATGCA
TTGATTCAGCTAATAAAAGATCATGGCCGATGGGTTGAACCACCCTCAGACGAAGAATGA
AGAGTGTATATGCATCGTCGTCGTCGGTAGATAGAAAATAAAAGGGCAGCAGACAAAGAA
AGAACACAGTTGTCTGTTTTTTTTTTTTTTTTTTAAGTATTGAAATGATGAAGAATGAGA
GCACACAATATGATTTTTAACAACCCAAAAATAAAAATTTGAAACACATAGTTTAATTAG
TTTGTAAGATCTTCAAGAGCTTAATCAATAGAGTTTGACATTTTTATTCAATCAAATATG
AC
|
| EST members of Unigene |
JK499038 JK497832 JK495210 JK500589 JK495226 JK496019 JK498054 JK501966 JK501206 JK496589 JK498209 JK501384 JK500743 JK496973 JK496365 JK494231 JK496633 JK498057 JK497864 JK495359 JK501123 JK497759 JK500123 JK496103 JK497102 JK495690 JK496282 JK497087 JK496433 JK497246 JK494313 JK497043 JK499493 JK497492 JK502039
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
|
| Corresponding NCBI Gene |
836181
|
| Trichome-related Gene from Literature |
836181
|