| Acc. |
TCHL53337 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, chloroplastic OS=Arabidopsis thaliana E-value=1e-46; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica E-value=5e-37; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Protochlamydia amoebophila (strain UWE25) E-value=7e-13; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Akkermansia muciniphila (strain ATCC BAA-835) E-value=2e-08; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain CC9311) E-value=3e-07; |
| Length |
700 nt |
| Species |
Humulus lupulus |
| Belonged EST Libraries |
SRR546168 (1 ESTs); SRR546170 (1 ESTs); |
| Sequence |
CAGTTGATTTCATATTGAGCTGTGTTATGGAATTTTCAGGCAAGCCTTTGCTTTGCGGTT
GTGGAAATGGCTACTGGAGCTGTACCTGCTTCGATTTCATGTCTGAAAAGCAGAGACCCT
GGCTTGAGCTTTGCTAAAAGTTCGGATTTTGTGAGGCTTTCTGATTTAAAGAAGATTAAT
TCATGTAGAACAAGAGTTTCGGTTATCCGAAATTCAAATCCTGGTTCAGATATCGCGGAA
CTTCAGCCCGCATCAAAAGGAAGCCCTCTATTAGTTCCTAGACAGAAGTACTGTGAGTCC
CTACACAAAACTGTCAGGAGGAAGACACGAACTGTGATGGTGGGAAATGTGGCTCTTGGC
AGTGAGCATCCCATCAGAATTCAAACGATGACTACAAGTGACACTAAAGATGTTGCTGGA
ACAGTTGAAGAGGTTTTATAACTTCTCTAGTGGATAAGTTATTTATAAATGTAGATTTTT
TTGTTCTCTGTGGACACAGTATTGACTGTATGTTTCGTTATATTATCTTATCTATGACTG
CAGTTAGTATGTATGTCATTTGATATTCTATCTTGTGGTTGCTGCAAACTATCTAGAAAG
TAACATGCTATTTGGTCAAAACATATGTTAATATAACAGTTATTCATAGGCCCAATTGCA
CAAGCAAAAGTTTGATACTAATTTGAATTTATGAGTATGA
|
| EST members of Unigene |
GD248540 SRR546170.113025 SRR546172.58617 GD248441 SRR546168.22018 SRR546172.39466 SRR546172.56262 SRR546168.44960 GD248694 GD253382 SRR546168.94761 SRR546172.99681 SRR546172.52344
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
|
| Corresponding NCBI Gene |
836181
|
| Trichome-related Gene from Literature |
836181
|