Detail of EST/Unigene TCHL54850 |
Acc. | TCHL54850 |
Internal Acc. | |
Type | TC/Unigene |
Annotation (Top 5 hits in Uniprot_trembl) | E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase TOM1-like OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) E-value=4e-94; E3 ubiquitin-protein ligase ptr1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=5e-92; E3 ubiquitin-protein ligase HUWE1 (Fragment) OS=Rattus norvegicus E-value=2e-88; |
Length | 1428 nt |
Species | Humulus lupulus |
Belonged EST Libraries | SRR546165 (29 ESTs); SRR546172 (22 ESTs); SRR546170 (16 ESTs); SRR546168 (6 ESTs); |
Sequence | AAATAACGCTACTTTCCAGCCTAACCCTAATTCTGACTTCCAGACAGAACATCTTTCTTA |
EST members of Unigene | SRR546172.107668 SRR546172.81958 SRR546165.38997 SRR546172.74047 SRR546165.167897 SRR546172.29224 SRR546170.75717 SRR546165.281320 SRR546165.111839 SRR546168.61605 SRR546170.57923 SRR546165.38991 SRR546168.22574 SRR546170.119936 SRR546172.94323 SRR546165.181207 SRR546172.138179 SRR546165.216989 SRR546170.76887 SRR546172.61758 SRR546172.36434 SRR546168.38302 SRR546172.67540 SRR546168.101672 SRR546165.274820 SRR546165.325249 SRR546165.230172 SRR546172.76216 SRR546172.25976 SRR546165.214315 SRR546170.91771 SRR546170.1154 SRR546172.90880 SRR546172.138220 SRR546172.53971 SRR546168.14163 SRR546172.64174 SRR546170.34831 SRR546165.206065 SRR546165.149254 SRR546165.317759 SRR546170.58619 SRR546165.269455 SRR546165.192725 SRR546165.3710 SRR546172.126704 SRR546165.59572 SRR546172.26797 SRR546165.179966 SRR546165.199481 SRR546170.138959 SRR546172.112588 SRR546170.104381 SRR546172.70456 SRR546165.25194 SRR546170.87023 SRR546170.64083 SRR546170.166296 SRR546170.12879 SRR546170.40899 SRR546165.271825 SRR546165.194324 SRR546172.68975 SRR546165.95183 SRR546170.76817 SRR546172.122493 SRR546165.138636 SRR546165.302311 SRR546172.99870 SRR546165.174963 SRR546165.48789 SRR546168.36627 SRR546165.242233 |
InterProScan Domain | |
Gene Ontology | |
KEGG Orthology | Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10592 E3 ubiquitin-protein ligase HUWE1 |
EC | 6.3.2.19 |
Transcription Factor Family | |
Transporter Classification Family | 8.A.3 Cytoplasmic membrane-periplasmic auxiliary-1 protein MPA1 plus a cytoplasmic domain MPA1-C or MPA1+C |
Probeset |
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Corresponding NCBI Gene | 842036 |
Trichome-related Gene from Literature | 842036 |