Detail of EST/Unigene TCHL54850
Acc. TCHL54850
Internal Acc.
Type TC/Unigene
Annotation (Top 5 hits in Uniprot_trembl) E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase TOM1-like OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) E-value=4e-94; E3 ubiquitin-protein ligase ptr1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=5e-92; E3 ubiquitin-protein ligase HUWE1 (Fragment) OS=Rattus norvegicus E-value=2e-88;
Length 1428 nt
Species Humulus lupulus
Belonged EST Libraries SRR546165 (29 ESTs); SRR546172 (22 ESTs); SRR546170 (16 ESTs); SRR546168 (6 ESTs);
Sequence AAATAACGCTACTTTCCAGCCTAACCCTAATTCTGACTTCCAGACAGAACATCTTTCTTA
CTTCAAGTTTGTGGGGCGTGTGGTTGCAAAGGCACTGTTTGACGGGCAACTTCTGGATGT
CTATTTCACTCGATCTTTCTATAAACACATACTTGGTGTGAAGGTGACTTACCATGATAT
AGAAGCCGTTGATCCTGATTACTACAAGAATTTGAAGTGGATGTTGGAGAATGATGTGAA
TGACATTCTTGACCTGACGTTTAGCATGGATGCTGATGAAGAAAAACACATTCTTTATGA
GAAAAACCAGGTCACTGATCATGAACTCAAACCTGGAGGAAGAAACATAAGGGTGACAGA
AGAAACCAAACACGAGTACGTGGATCTTGTTGCTGATCACATATTGACCAATGCCATTCG
TCCTCAAATTAATGCCTTTTTAGAAGGTTTCAATGAATTGGTTCCAAGAGAGCTTATCTC
TATTTTCAATGATAAAGAACTGGAGCTACTTATAAGTGGTCTTCCCGAAATTGATTTGGA
TGATTTGAAAGCCAACACCGAGTACACTGGTTACACAGCTGCATCAAGTGTTGTTCAATG
GTTTTGGGAGGTTGTGAAAGGTTTCAACAAGGAAGACATGGCTAGACTGCTACAATTTGT
GACTGGAACATCAAAGGTTCCTTTAGAGGGTTTCAAGGCTTTGCAAGGTATTTCAGGTCC
TCAGAGGTTTCAGATTCACAAGGCATACGGTGCTCCTGACCGGCTGCCCTCAGCACATAC
ATGCTTTAATCAATTAGACCTCCCCGAGTATACCTCGAAGGATCAACTCCACGAACGGTT
GCTACTTGCCATTCACGAAGGTAGCGAAGGGTTCGGTTTTGGTTAAGTGTTACTTCTGCG
AGACATATTGTTGGCCCAGTGAACTTGCAATCTACTTTTTAAGTTCCCATGTGTACATAC
AGATAGAACAAATGGACTCGGAGCGGAGCAGGGTATTTTAGACGTTCTCCGTCGTTAAAA
TTTGATTTTGAATGGATTCTAGGGATGCTGGGAAACAATGCTTTTTGTAGAGACACCGTC
GTGGTTTAATTTTTCCGTTTTGAAGAACAAAGGGGTCGCTAGATTCTTGGTTGCGAAAAT
GGCTTTGGGAGGATTAAATATTCTTTTTCTTCTTCTTCTCTAAATTCCTAGCCATCTCAA
ATGATATGATTATGATGAGGGTCATACACAAATTTACAATTGATATCTCTCTATGCTTTT
ACTGTTCTGTTCATATTAGATTTTCTACTAGTTTATCTCTCTATCGATCTCTCACTACAT
TTTGGCCAAATTGCCTCATTTACTCAGTTTCTTTCTCTCTTTTTTTAATGTGAATCTTCA
AAAGCTTAGTCTGTATATGCAATTGAACTTATTCTACATATATAATTC
EST members of Unigene SRR546172.107668  SRR546172.81958  SRR546165.38997  SRR546172.74047  SRR546165.167897  SRR546172.29224  SRR546170.75717  SRR546165.281320  SRR546165.111839  SRR546168.61605  SRR546170.57923  SRR546165.38991  SRR546168.22574  SRR546170.119936  SRR546172.94323  SRR546165.181207  SRR546172.138179  SRR546165.216989  SRR546170.76887  SRR546172.61758  SRR546172.36434  SRR546168.38302  SRR546172.67540  SRR546168.101672  SRR546165.274820  SRR546165.325249  SRR546165.230172  SRR546172.76216  SRR546172.25976  SRR546165.214315  SRR546170.91771  SRR546170.1154  SRR546172.90880  SRR546172.138220  SRR546172.53971  SRR546168.14163  SRR546172.64174  SRR546170.34831  SRR546165.206065  SRR546165.149254  SRR546165.317759  SRR546170.58619  SRR546165.269455  SRR546165.192725  SRR546165.3710  SRR546172.126704  SRR546165.59572  SRR546172.26797  SRR546165.179966  SRR546165.199481  SRR546170.138959  SRR546172.112588  SRR546170.104381  SRR546172.70456  SRR546165.25194  SRR546170.87023  SRR546170.64083  SRR546170.166296  SRR546170.12879  SRR546170.40899  SRR546165.271825  SRR546165.194324  SRR546172.68975  SRR546165.95183  SRR546170.76817  SRR546172.122493  SRR546165.138636  SRR546165.302311  SRR546172.99870  SRR546165.174963  SRR546165.48789  SRR546168.36627  SRR546165.242233 
InterProScan Domain  
Gene Ontology  
KEGG Orthology Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10592 E3 ubiquitin-protein ligase HUWE1
EC 6.3.2.19 
Transcription Factor Family
Transporter Classification Family 8.A.3 Cytoplasmic membrane-periplasmic auxiliary-1 protein MPA1 plus a cytoplasmic domain MPA1-C or MPA1+C
Probeset
Corresponding NCBI Gene 842036 
Trichome-related Gene from Literature 842036