| Acc. |
TCHL59960 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase COP1 OS=Pisum sativum E-value=0; E3 ubiquitin-protein ligase RFWD2 OS=Mus musculus E-value=5e-61; E3 ubiquitin-protein ligase RFWD2 OS=Homo sapiens E-value=5e-61; Protein SPA1-RELATED 3 OS=Arabidopsis thaliana E-value=2e-55; |
| Length |
864 nt |
| Species |
Humulus lupulus |
| Belonged EST Libraries |
SRR546165 (8 ESTs); SRR546168 (5 ESTs); SRR546172 (3 ESTs); SRR546170 (1 ESTs); |
| Sequence |
GTGGAGTGTTGACTTTTCACGGACAGAACCGTCGAGGCTTGTATCTGGTAGTGATGATTG
TAAGGTTAAGGTTTGGTGCACACAGCTGGAATCTAGTGTTATTAACATTGACATGAAAGC
AAACATATGTTGTGTCAAGTACAACCCTGGATCTAGCAATTACATTGCGGTTGGTTCAGC
AGACCATCACATCCACTATTACGATTTAAGAAATTACAGCCAGCCGCTTCACGTGTTCAG
TGGGCATAAGAAAACTGTTTCGTATGTGAAATTCTTGTCAAACAACGAGCTTGCCTCTGC
ATCAACAGACAGTACATTACAGTTATGGGATGTGCAGGATAATAAGCCTCTTCGCACTTT
TAAAGGACACACAAATGAGAAGAACTTTGTTGGTCTCTCAGTAAATAGCGAGTACATTGC
TTGTGGCAGCGAAACAAACGAAGTGTTTGTCTACCATAAGGAAATTTCAAACCCTGTGAC
ATGGCATAGATTTGGTTCGCCCGATTTGGACGATGTGGAAGATGATGCAGCATCTTACTT
CATCAGCGCTGTATGCTGGAAGAGAGACAGCCCCACCATGCTCACCGCTAACAGTCAGGG
AACCATTAAAGTGCTTGTTCTTGCAGCCTAAAGGACAAAACTAAATAAGTTTAGAGATTG
AAGCTGGAACGGGATAAATATATTCCATCCTTTTTTTGTTCTTCTTGATTTAAAGTTGGG
ATAAAGCCGTTGCTGCATTATTAAATGTAATTATTCTTGTGCATATTATTGAAATGTAAA
ATTGGTAGGCTTTAGAAGGGCATGGAATGTAGTTGTACTAATAAATTTTGAGTTGAAAAA
CGATTACTTATAGAGTTGAATTCT
|
| EST members of Unigene |
SRR546165.93282 SRR546168.127880 SRR546172.143029 SRR546168.53121 SRR546165.172922 SRR546168.107036 SRR546172.39538 SRR546165.87090 SRR546170.127068 SRR546165.174024 SRR546168.118698 SRR546168.47216 SRR546172.23908 SRR546165.200080 SRR546165.43563 SRR546165.229286 SRR546165.26372
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10143 E3 ubiquitin-protein ligase RFWD2 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
3.A.2 H+- or Na+-translocating F-type, V-type and A-type ATPase superfamily F-ATPase |
| Probeset |
|
| Corresponding NCBI Gene |
817857
|
| Trichome-related Gene from Literature |
817857
|