| Acc. |
TCHL60448 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana E-value=3e-67; Ubiquitin-protein ligase E3C OS=Homo sapiens E-value=5e-36; Ubiquitin-protein ligase E3C OS=Mus musculus E-value=6e-36; E3 ubiquitin-protein ligase UPL7 OS=Arabidopsis thaliana E-value=4e-33; Probable E3 ubiquitin-protein ligase HUL5 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) E-value=5e-33; |
| Length |
824 nt |
| Species |
Humulus lupulus |
| Belonged EST Libraries |
SRR546170 (6 ESTs); SRR546172 (5 ESTs); SRR546165 (3 ESTs); SRR546168 (2 ESTs); |
| Sequence |
GCATTATAACATGTCATAAATAATGCAAACTTCTTATTTACAAAAATATATTGTGGGAAA
TTTTACATATACAATTTGAACCATTTTTTTTTTTACAATTATAATTACTTGCCGAAAAGC
AGATGACCCCTCCACATATTATTGACATGTTAACTGAGGAGGCTATCAAGAAATATAAAT
ATGAAAATATTTTCCCAATCCTATTTGGGGGCTTTAGGGTCTGCTTTTACCGTCTGGGTA
AGATAGGTAGTATTCGCGGGTCCTAGCTGCCGCTTCCAACCATGATGAGAAAACGATTTT
CCAGACAAGGTTTCTTGTAAAACTGTCCATGAAATACTGATTGGAGCAGAAATTTTGGAA
ATGGTAGGAGGTGAATAGAGAGAACAAACCCCTCAGCTCAAATCAAAACCAGCATCAGCA
TTGATTGCGTACATCAGTTTATTTTCTAGTTGCTCCTTGCTTCTATAAGGTGGAAGCTTT
AGAAGGTTCATACAAGTAGCTGATGTTGGTAATCGGTCAAGAGCTTCTTCAGTAGCACTC
CCAGCCGCCCTCTGTATACAAAACAGTGGCTCAAGAAATTTGAATCCAAGCAGTGGTCCT
CGAGAGCACCCGGTCACAAACTTAAGAAACTTCTTCTGATTTTCCATTGAGAAGCTTTTC
AGAACTTCCCAGAACATCTCAATGACATAATGCTCACTATGATAGCCACCAGCATAATTG
GTATTTGATCGTAAATCATCAACATCCAAGCTTGCAAGTGAACCTGATATCAGAAGCTGC
AGTTCATGCTCATTAAACATATCAATCCAATCCTTTTGTATAAG
|
| EST members of Unigene |
SRR546170.107791 SRR546172.36012 SRR546172.44324 SRR546165.316943 SRR546168.5264 SRR546165.199843 SRR546165.97045 SRR546170.97915 SRR546170.165334 SRR546172.145246 SRR546170.166815 SRR546172.15596 SRR546172.100078 SRR546170.13821 SRR546168.21367 SRR546170.151597
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10589 ubiquitin-protein ligase E3 C |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
8.A.3 Cytoplasmic membrane-periplasmic auxiliary-1 protein MPA1 plus a cytoplasmic domain MPA1-C or MPA1+C |
| Probeset |
|
| Corresponding NCBI Gene |
820979
|
| Trichome-related Gene from Literature |
820979
|