| Acc. |
TCMT56941 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana E-value=1e-69; E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana E-value=9e-69; E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus E-value=1e-19; E3 ubiquitin-protein ligase HUWE1 OS=Homo sapiens E-value=5e-19; E3 ubiquitin-protein ligase TOM1-like OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) E-value=1e-15; |
| Length |
1683 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_DSTEM2 (3 ESTs); MT_SEEDROOT_KV3 (1 ESTs); MT_LEAF_PHOMA (1 ESTs); MT_DLEAF (1 ESTs); |
| Sequence |
CCTAATCAGGATGGAGCAGAAGCAGGTTCTCATGGTAATGTTGAAACCAGCCAGGCACAA
GATTCAGGCGGTGCAATGCCAGAAATCCCTGTTGAGAGTAATGCCATCCAAGGAGTTGGT
ATAACTACTCCTTCAATAATTGATAACAGTAATGATGCTGGTATCAGACCTGCAGGGACA
GGAGAGCAAACAAATGTATCAAACACTCACTCACCGGCTGCTGAGATGCCATTCGAGCAT
AATGATGGTGCTTTGAGGGATGTTGAAGCCGTGAGCCAGGAGAGTGGTGGTAGCGGAGCA
ACTTTTGGGGAAAGCCTCCGGAGCCTAGATGTTGAGATTGGAAGTGCTGATGGCCATGAT
GATGGTGGGGAAAGACAGGTTTCTGCAGACAGAATAGCTGGTGATTCACAGGCTGCACGC
TCAAAGAAGAGCAAATATGCCTCCTGGTCATTTCCCCCCTGTTATTGGAAGAGATACACC
CCTTCACAGTGTTGCTGAAGTTTCTGAGAATTCCAGTCGTGATGCAGATCAAGTGAGTCC
AGCAGCAGAGCAGCAAGTGAATAGTGATGCTGGATCAGGAGCAATTGATCCTGCTTTTCT
AGATGCTCTTCCTGAGGAGCTGCGTGCAGAAGTCCTCTCTGCACAGCAAGGTCAAGTGGC
TCAGCCACCAAATGTCGAATCTCAGAGCTCTGGGGATATTGACCCAGAGTTCCTTGCTGC
CCTCCCTGCAGATATTCGAGCAGAAGTTCTAGCTCAACAGCAAGCACAGAGGTTAAATCA
GTCTCAGGAGTTGGAAGGTCAACCTGTAGAAATGGATACAGTCTCAATAATTGCAACGTT
TCCTTCAGATTTACGAGAAGAGGTTCTGTTAACTTCATCTGATAACATCCTTGCCAATCT
TACACCTGCCCTTGTCGCCGAGGCAAATATGTTGCGGGAGAGGTATGCACACCGTTACAG
TCGTACCCTCTTTGGTATGTATCCAAGAAGCCGTAGAGGTGAGACTTCAAGACGTGATGG
CATTGGTTCTGGCCTAGATGCAGTAGGGGGGCCTATTTCTTCACGCCGGTCCAGTGGAAC
TAAGGTTGTTGAAGCTGATGGAGCTCCACTAGTTGATACGGAAGCCTTGCATGGCATGGT
TCGGTTATTTCGCATGGTGCAGCCACTCTACAAAGGCCAATTGCAGAGGCTTCTTTTAAA
TCTTTGTGCTCATAGTGAAACAAGAATATCTTTGGTGAAAATTCTGATGGACTTGCTAAG
GCTTGATGTGAGAAGATCTGTCAGTTCATTTGGCACTGTTGAGCCACCGTATAGATTATA
TGGTTGTCAGAGCAACGTAATGTATTCACGCCCTCAGTCTTTTGATGGAGTACCCCCACT
GCTGTCTCGACGAGTTCTTGAAACCCTGACCTATCTTGCTCGTAATCATCTATATGTGGC
AAAGAGTTTGCTTCAGTCTAGGCTTCCTCATCCTGAGATTAAAGAACCAAATAACACTAG
TGATGCACGTGGCAAAGCCGTGATGGTTGTTGAAGATGAAGTCAATATAGGTGAAAGTAA
TAGAGGGTACATCTCTATTGCAACGCTTTTGGCTCTTTTTGAACCAGCCACTTTATTTGA
GGAGTATAGCCCATCTTGAACAGCTGCTAAATTTACTGGATGTAATCATTGATAGTGCTG
GAA
|
| EST members of Unigene |
AW693343 AW692896 AW697122 AW774018 BQ138111 BG452809
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10592 E3 ubiquitin-protein ligase HUWE1 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.9296.1.S1_at
|
| Corresponding NCBI Gene |
842036
|
| Trichome-related Gene from Literature |
842036
|