| Acc. |
TCSF11114 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Protein HOTHEAD OS=Arabidopsis thaliana E-value=8e-91; (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana E-value=9e-31; (R)-mandelonitrile lyase 1 OS=Prunus serotina E-value=4e-26; (R)-mandelonitrile lyase 4 OS=Prunus serotina E-value=2e-24; (R)-mandelonitrile lyase 3 OS=Prunus serotina E-value=5e-23; |
| Length |
764 nt |
| Species |
Solanum pimpinellifolium |
| Belonged EST Libraries |
SRR027942 (16 ESTs); |
| Sequence |
TTCAAAAGATTGACTTTGATACATCAGGAAAGAAGCCACGGGCAGTGGGAGTCATTTTCA
AAGATGAAAATGGGAAAGAACACAAGGCATTTCTTTCGACTAGGAAGGGAAGTGAGATTA
TAGTGTCATCTGGTGCAATTGGGAGCCCTCACATTCTGATGCTTAGTGGAATCGGACCAA
AGGCCGAATTGGAAAAGTTCAACATCCCGGTGGTTCTTGACAATAAGTTTGTTGGTCAAG
GAATGTCAGACAACCCCTTGAACACGATCTTCGTCCCCACAAATAGGCCCGTTGAACAGT
CACTGATTCAGACCGTAGGGATTACGAAAAAGGGAGTCTACATTGAAGCAAGTAGTGGAT
TTGGACAATCAGGAGATAGCATCAGTTGCCATCATGGAGTCGCTTCAGCTGAGATTGGGC
AACTGTCCACCATTCCTCCGAAACAGAGAACAGTAGAAGCAATTGAAGCATATCGAAAAA
GCAAGAAAAACATACCACACGAGGCGTTCAAGGGAGGTTTTATCTTAGAAAAGATAGCAC
TACCTTTGTCAAGAGGGAACATTAGCCTGGTGACTACTAATCCTGACGACAACCCTTCCA
TCACCTTCAACTACTTCAGCCATCCACGTGATCTAAAACGATGTGTAGATGGTATACGCA
TTGTGGAGAAGATAGCGAAATCTAAACACTTCACCAACTTCACACAGTGTAACAAAGAGA
CACTAGATAGGCTGCTTAACATGAGTGTCCAAGCTAATGTTAAT
|
| EST members of Unigene |
SRR027942.50887 SRR027942.142728 SRR027942.238516 SRR027942.234010 SRR027942.35596 SRR027942.128126 SRR027942.297373 SRR027942.243572 SRR027942.209282 SRR027942.240157 SRR027942.84079 SRR027942.29199 SRR027942.76471 SRR027942.158063 SRR027942.158675 SRR027942.201049
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Metabolism > Amino Acid Metabolism > ko00260 Glycine, serine and threonine metabolism > K00108 choline dehydrogenase |
| EC |
1.1.99.1 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
|
| Corresponding NCBI Gene |
843628
|
| Trichome-related Gene from Literature |
843628
|