| Acc. |
TCSF11246 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Pleiotropic drug resistance protein 1 OS=Nicotiana tabacum E-value=0; Pleiotropic drug resistance protein 1 OS=Nicotiana plumbaginifolia E-value=5e-96; ABC transporter G family member 40 OS=Arabidopsis thaliana E-value=2e-88; Putative pleiotropic drug resistance protein 7 OS=Oryza sativa subsp. japonica E-value=5e-81; Pleiotropic drug resistance protein 4 OS=Oryza sativa subsp. japonica E-value=2e-80; |
| Length |
692 nt |
| Species |
Solanum pimpinellifolium |
| Belonged EST Libraries |
SRR027942 (15 ESTs); |
| Sequence |
GTGGATTCGTTCTTTCACGAGTTGATGTGAAGAAATGGTGGTTATGGGGTTACTGGTCAT
CACCGATGATGTATGCTATGAATTCAATTCTTGTGAATGAATTTGATGGAAAAAAGTGGA
AACAAATTGCACCAAATGGAACTGATTCACTTGGAGTTACAGTTGTAAGATCTCGAGGGT
TCTTCACAAATGCATACTGGTACTGGATAGGCGTTGGTGCACAAATTGGTTTCACAATCG
TCTTTAACATCTGCTACAGTATTGCACTCGCTTATCTCAACCCATTTGGTAAGCCGCAAG
GTATGATATCAGAAGACAGTGATGATGCCAAAACAACGAGCACTGAGAAAGAAGTGTCCA
CTAGTGAGGGCCAGAATAAGAAAAAGGGAATGGTTCTTCCATTTGAACCGCATTCTATAA
CCTTCGATGAAGTTACATACTCTGTTGACATGCCTCAGGAAATGAAAAATCAAGGTGTCA
CTGAAGATAGATTGGTACTTCTGAATGGTGTATCTGGAGCTTTCAGGCCCGGTGTTTTGA
CAGCATTGATGGGAGTTAGTGGCGCTGGAAAAACAACGTTAATGGATGTATTGGCCGGAC
GAAAAACAGGAGGATATATTGAGGGTAGTATCAAGGTATCTGGCTATCCGAAGAAGCAAG
AAACATTTGCACGTATATCCGGATACTGTGAA
|
| EST members of Unigene |
SRR027942.90661 SRR027942.250463 SRR027942.135728 SRR027942.67000 SRR027942.21077 SRR027942.279805 SRR027942.249088 SRR027942.36372 SRR027942.61871 SRR027942.76644 SRR027942.132280 SRR027942.163979 SRR027942.275581 SRR027942.299265 SRR027942.166212
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Environmental Information Processing > Membrane Transport > ko02010 ABC transporters > K05679 ATP-binding cassette, subfamily G (WHITE), member 1 |
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
3.A.1 ATP-binding-cassette superfamily ABC ABC-type importers (all from Bacteria and Archaea) |
| Probeset |
|
| Corresponding NCBI Gene |
838122
|
| Trichome-related Gene from Literature |
838122
|