| Acc. |
TCSF11258 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Protein pleiotropic regulatory locus 1 OS=Arabidopsis thaliana E-value=0; Protein pleiotropic regulator PRL2 OS=Arabidopsis thaliana E-value=1e-98; Pre-mRNA-splicing factor prp5 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=2e-70; Pre-mRNA-splicing factor prp46 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) E-value=1e-66; Pre-mRNA-splicing factor prp46 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) E-value=1e-66; |
| Length |
689 nt |
| Species |
Solanum pimpinellifolium |
| Belonged EST Libraries |
SRR027942 (12 ESTs); |
| Sequence |
TATGTATTACAAAGGGTTGCTTTCTGAATTACGATTACAACTAGAAACGCCTAATGTCTT
TTGGAGGCTTAAAGTGAAGAGGATGAGTTTCTGGGGTAGCAGTTTCGTCTTCTTTCCACA
TCTTGATGGTCTTATCAGCTTCACAGCTGATCAGCCTTGAGCCGGTTACATCGTAGGTGA
GGGCATAAATGCCAGCCTCACTGTCCAGTGACCCAGGTTGAACAATAGTTTGAGATTGCT
GGAAATTGTGACCGCTTTTCCAATCCCAAAACCACATGCTTCCATTGTCACCTCCAGTGA
CCATTACACCGTCATTATTAATTGCCATCGCGTTGACTATGGTTTTCTGTTGGGAAAGCA
TGTTGTGCATAAATTCTCCTTTTGGAAGACTGAACTTTTTTATGTTGTCTGCTGATGCAG
AAGCAAAACAATCCTCTGTAGGATGCTGAGCCATAGCTCGAACAGATTTCTTGTGATGTG
TGAGAGTTGCCATTGTCTTACCATATCTAAGGTCCCAGAACTTAATGGTACTGTCATGAG
AGCCAGTTATAACCTGTGGATCCATCGGCCTGGTAAAAACAGAACAAACAGTATTGTCAT
GTCCAGATAAAGCATGAATTTGCATTTTGCTACGAATATCCCAAACCCGGCAGACAGAAT
CACGACCCCCGGTGAACAAGATGTCAATG
|
| EST members of Unigene |
SRR027942.286794 SRR027942.68594 SRR027942.125819 SRR027942.78376 SRR027942.136732 SRR027942.83437 SRR027942.16927 SRR027942.30662 SRR027942.234900 SRR027942.102852 SRR027942.253669 SRR027942.261276
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
|
| Transcription Factor Family |
C3H |
| Transporter Classification Family |
3.A.2 H+- or Na+-translocating F-type, V-type and A-type ATPase superfamily F-ATPase |
| Probeset |
|
| Corresponding NCBI Gene |
827272
|
| Trichome-related Gene from Literature |
827272
|