| Acc. |
TCSF11345 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
40S ribosomal protein S13 OS=Glycine max E-value=1e-78; 40S ribosomal protein S13-2 OS=Arabidopsis thaliana E-value=4e-76; 40S ribosomal protein S13-1 OS=Arabidopsis thaliana E-value=7e-76; 40S ribosomal protein S13 OS=Pisum sativum E-value=3e-75; 40S ribosomal protein S13-2 OS=Oryza sativa subsp. japonica E-value=9e-71; |
| Length |
659 nt |
| Species |
Solanum pimpinellifolium |
| Belonged EST Libraries |
SRR027942 (16 ESTs); |
| Sequence |
AGCTACAATTTGAGCAACACAGTTCAGTGAGCTCACTCTAATCTTCGCCATGGGTCGTAT
GCACAGTCGCGGTAAGGGTATCTCAGCGTCGGCTCTTCCTTACAAGAGAACTCCTCCAAG
TTGGCTTAAGATCTCTGCTCCAGATGTGGAGGACAATATCTGCAAGTTTGCGAAAAAAGG
ACTGACACCTTCACAAATTGGTGTGATTCTTCGTGATTCTCATGGAATTGCTCAAGTCAA
GAGTGTCACCGGGAGCAAGATTTTGCGTATCCTCAAAGCTCACGGACTTGCTCCTGAGAT
TCCGGAGGATCTATACCACCTTATTAAGAAGGCAGTTGCCATCAGGAAGCATTTGGAGAG
GAACAGAAAGGACAAGGATTCCAAGTTCCGCTTGATTTTGGTGGAGAGTAGGATTCACCG
CCTTGCTCGTTATTACAAGAAAACTAAGAAGCTTCCACCTGTCTGGAAATATGAGTCTAC
CACAGCAAGTACACTAGTAGCTTAAACTGAGACATGGATGGATTATTAGCTTTGAGAAGA
AAGATTGATCAGCTGAAGTCTTTTCTTCTCTATGTATTCGAATAGTTCTCAGGTCCATTT
TTTTGAATTCTGATACTTATAGATGCTTTAATTTTGGGTATTGATGTCAATTTCTTTCG
|
| EST members of Unigene |
SRR027942.197531 SRR027942.12954 SRR027942.16906 SRR027942.36787 SRR027942.16142 SRR027942.211506 SRR027942.286017 SRR027942.50468 SRR027942.230049 SRR027942.27629 SRR027942.126272 SRR027942.214335 SRR027942.60247 SRR027942.96049 SRR027942.285540 SRR027942.99189
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Translation > ko03010 Ribosome > K02953 small subunit ribosomal protein S13e |
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
|
| Corresponding NCBI Gene |
828167
|
| Trichome-related Gene from Literature |
828167
|