| Acc. |
TCSH52004 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Agamous-like MADS-box protein AGL8 homolog OS=Solanum tuberosum E-value=0; Agamous-like MADS-box protein AGL8 homolog OS=Solanum commersonii E-value=0; Agamous-like MADS-box protein AGL8 homolog OS=Solanum lycopersicum E-value=1e-84; Floral homeotic protein APETALA 1 OS=Sinapis alba E-value=9e-79; Agamous-like MADS-box protein AGL8 OS=Arabidopsis thaliana E-value=2e-78; |
| Length |
1129 nt |
| Species |
Solanum habrochaites |
| Belonged EST Libraries |
SRR027941 (13 ESTs); SRR027940 (12 ESTs); LIBEST_025268 (4 ESTs); SH_TRI (1 ESTs); |
| Sequence |
ATGAGCAATAAATATTAGTGCTAGTGGTAAAATGTTTTTACACAAAACACCCTAAGAGAG
GATGATATATGGTACTACTACAATATATTGTGCATATTGTTACACAACAGCCATATATAC
ACCATACACAATTAAGTAGATATGAAAGTTGTGTTTGTCTAATATGTAACATACATATAT
ATAATATTTATGTGCATATACTATTAGTGATTAATAGATAACATAATATTGTCCGCTTGG
TTTATACTTAATTAAGTTTTAACTTAACCGTTGAGATGGCGAAGCATCCATGGAGGCATC
ACAGAAGCACTGTTTTGTTGTTGTTGCCGCGATGATCCTTCAACTTCTCCATTGTCTCCT
GCATTTGGGTATGCTTCCCCTATGTGAAGATTGTTAAAGGGGTGTGGCAAAACAAACGAA
GATGAATTGAGATGATCATGACTCTGTTGCTCCCACGGAGTCTGTTGGGCCATCTCTTTC
TCCCTTTCCTTAACCTGCTTTGAAAGATTGTTGTTTTGTTCTTGCAATGCCTTGTCCTTC
TTTTGCAGCTCAGAAATGGATTCATGCATCAATTGGTTCTTTCTAGATCGAATGTGCTTT
AGAGCAGAATCGAGCTGGTGTTCCAGATTCTGAAGCTCTTTCATACTCAATGTGTCCAAC
TCTTCTCCTGCATAATGCTTTTGGTTTCTTTGCAAAACCTCAAGTCTGGCCTTAAGCTTA
GCATGTTCCAAAGTCCAGCTACCCGGGGTTACAATATCAGTAGCATTAAGCTGCCTTTCA
GCATATGAGTACCTTTCATACCTTTCAAGAATCCTTTCCATGCAAGAGTCAGTAGAATAC
TCAAAGAGTTTTCCTTTAGTTGAGAAAACAATGAGTCCAACTTCAGCATCGCAAAGCACA
GAGATCTCATGAGCTTTTTTAAGCAAACCAGATCGCCTCTTTGAAAAAGTAACTTGACGA
TTAATTTTGTTCTCAATTCTCTTCAATTGTACTCTTCCTCTACCCATATTAATTTCTTCT
TTCTTCTTTCTGTGTGTATATATATGTATATTGTGTAATGAAAATGGATATTTATGTTTA
GTATTTCTTTGTTTTTGGCAAATGATAGATAAAAACTGTATCGTTATTC
|
| EST members of Unigene |
SRR027941.170816 SRR027940.124522 SRR027941.27286 SRR027940.106546 SRR027940.100944 SRR027940.67694 GT182389 SRR027940.31431 SRR027940.87075 SRR027940.70079 SRR027941.229450 SRR027940.113177 SRR027940.69921 GT182340 GT178039 SRR027941.210843 SRR027941.248671 SRR027941.114712 SRR027941.88689 SRR027940.121904 SRR027941.202112 AW616126 SRR027941.186402 SRR027940.26693 SRR027941.26425 SRR027940.121565 SRR027941.202969 SRR027941.44291 GT177988 SRR027941.28807
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Environmental Information Processing > Signal Transduction > ko04010 MAPK signaling pathway > K04454 MADS-box transcription enhancer factor 2C |
| EC |
|
| Transcription Factor Family |
MIKC |
| Transporter Classification Family |
|
| Probeset |
|
| Corresponding NCBI Gene |
836212
|
| Trichome-related Gene from Literature |
836212
|