| Acc. |
TCSL74353 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Protein ROOT HAIR DEFECTIVE 3 OS=Arabidopsis thaliana E-value=0; Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Arabidopsis thaliana E-value=0; Protein ROOT HAIR DEFECTIVE 3 OS=Oryza sativa subsp. japonica E-value=0; Protein ROOT HAIR DEFECTIVE 3 homolog 2 OS=Arabidopsis thaliana E-value=0; Protein ROOT HAIR DEFECTIVE 3 homolog 1 OS=Oryza sativa subsp. japonica E-value=0; |
| Length |
1705 nt |
| Species |
Solanum lycopersicum |
| Belonged EST Libraries |
SRR015436 (12 ESTs); SRR015435 (5 ESTs); SL_Lyc_leaf (4 ESTs); SL_cTOS (2 ESTs); SL_maturing_fruit (2 ESTs); SL_TAMU_CALLUS (1 ESTs); SL_FRUIT (1 ESTs); SL_CELL_BTI (1 ESTs); SL_ROOT (1 ESTs); |
| Sequence |
CTGGGACACATCCGATCTGATGCTTTTGAAAGATTTAAAGAAGCGTTTGAGAAGTCATTG
AAGGGGGGTAAAGGGTTTGCTCTGGCTGCTCGTGAATGTGCTGAGTCTTTTATGTCCCAT
TTTGATGAAGAATGCTCAGATGCTATTATTGACCAAGCAAAATGGGACTCATCAAGAGTG
AAGGATAAGCTGAGGCGTGATGTAGATGCTCATATTGCTGAAGTTCGCAGTGCCTAGCTG
GCTGAAGTGACAACCCTGTATGAGACAAAACTGAACGAGGCATTGGCTGGACCAGTTGAG
GCTCTTTTAGATGGAGCTGGCGATGATACATGGCCGGCAATAAGAAAATTGCTTCAGCGT
GAGACTGATACAGCAGTCTCTGGTTTTGCTGCTGCACTTTCTGGTTTTGAAATGGATGAA
GAAAGTAGGGATAACATGGTTTTGCGGTTGAAAGATTATGCACGAGGAGTAGTTGAAGCA
AAGGCAAAGGAAGAAGCTGGAAGGGTCTTGAGTCGCATGAAGGACAGGTTTTCAACATTG
TTCAGCCATGATCAAGATTCTATGCCACGAATTTGGACTGGCAAGGAAGATATTCGCGCA
ATCACTAAAACTGCACGATCAGCTTCTCTGAAGCTCCTGTCAGTTATGGCTGCAGTTCGC
TTGGAAGATGAGAGTGACAGTATAGACAAAGTACTTATAGTTGCTCTTGTAGATGGAAAA
GCAGGGGCTTCCTCCTCAAAGAGCATTACATCAGTTGATCCTCTAGCATCTAGCACTTGG
GATGAGGTCCCTCCATCAAAAACTTTGATTACACCTGTCCAGTGCAAGTCTTTGTGGAGG
CAATTCAAGACGGAGACTGAATATGTTGTTTCACAAGCCATTGCTGCTCAGGAAGCTAGC
AAGAGAAACAATAATTGGTTACCACCTCCATGGGCAATTGCTGCCATGGTGATTTTGGGA
TTCAATGAATTCATGACACTTTTAAGAAATCCTTTATATTTAGGGTTTATATTCGTCGCC
TATCTGCTATTTAAAGCTCTTTGGGTGCAAATGGATATCTCAGGCGAATTCCGCAATGGA
GTTCTTCCTGGACTTCTCTCTTTATCCACAAAGTTCCTTCCTACAATCATGAATCTTCTT
AAACGACTAGCAGAGGAAGGACAAGGTGTGGCAAATGGTCAACCTCAGGCTAACCCCGCT
CTTTCATCAAAGAGCTTCCGCGGTAGCACAAACGATCACGGTGATGTATCAACCAGTGGT
ACATCCGAAGTAACTTCAGAAAATGGAACAGAATACTCTAGCTCCTCCTTACATGACAAA
GCACAGTAAGCTATTGTTTATAACACCCACTCTTATTCTGCGACAGCAAAGTTTTAATGC
TCATCCAGACGTGGTATGGTGCACAAGTATGCTTGGTTGCGGCTAGCACTTTTAGAGACA
AAGCATATGAAAGAATCAGACACTGAAGGCATTGATTTTTGTACACCGAATAGGCTGTGT
TCTATTTCTCTCTTGTTCTTTTTACAGTTGATTTTTATTTTGTTGGTGAACTAAGAGGGC
CATTCTTTTCTGTGTTGTTTGTTATCATTCTCCTTGTTTGCCATCAAAATTTTCTTGTGA
GAAGCCTAATATAATGTCGGTATTTTATGGATAAGCTGATGAAAGATATCAGAAACTATA
TTTCTAATGAGATGGGATTTTTGTC
|
| EST members of Unigene |
SRR015436.291846 SRR015435.268537 SRR015436.130616 BP909054 AW041338 SRR015435.151813 BI209660 SRR015436.110896 AI895407 SRR015436.160527 BP906081 SRR015436.251068 SRR015436.325481 BI207405 SRR015435.112429 AW621911 SRR015436.335850 SRR015436.264156 SRR015436.142850 BP879006 BP906233 SRR015436.50092 BP906421 BP895797 SRR015435.332826 SRR015435.151339 SRR015436.213992 BE434787 SRR015436.69770
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
|
| Corresponding NCBI Gene |
820600
|
| Trichome-related Gene from Literature |
820600
|