| Acc. |
TCSL76429 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Vegetative incompatibility protein HET-E-1 OS=Podospora anserina E-value=3e-30; F-box/WD repeat-containing protein 7 OS=Mus musculus E-value=3e-28; F-box/WD repeat-containing protein 7 OS=Homo sapiens E-value=4e-28; Uncharacterized WD repeat-containing protein alr2800 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) E-value=6e-27; WD repeat-containing protein 5B OS=Rattus norvegicus E-value=4e-26; |
| Length |
1104 nt |
| Species |
Solanum lycopersicum |
| Belonged EST Libraries |
SL_TAMU (9 ESTs); SRR015435 (8 ESTs); SRR015436 (4 ESTs); SL_maturing_fruit (3 ESTs); SL_FRUIT (2 ESTs); SL_Lyc_leaf (1 ESTs); SL_breaker_fruit (1 ESTs); |
| Sequence |
CGGTGAAGATCTGGGATCCTAGCCTTCGTGGTGCTGAACTTAGGGCTACTCTGAATGGTC
ACACAAGGACTGTTAGGGCAATTAGTTCTGACCGAGGGAAGGTGGTATCAGGATCCGATG
ATCATTCTATTCTTGTATGGGATAAACAAACAACACAACTACTTGAAGAATTGAAGGGCC
ACAATGCACAGGTCAGCTATGTGCGCATGCTTTCAGGTGAACGTGTCCTTACTGCTGCCC
ATGATGGGACAGTAAAGATGTGGGATGTAAGAACAGATACTTGTGTTGCTACGGTAGGCC
GTTGCTCTGGTGCTGTTCTTTGCATGGAGTATGATGACTCAACAGGAGTCTTAGCTGCTG
CAGGCAGAGATGCGGTTGCAAACATTTGGGATGTTCGTGCTGGGAGGCAAATGCACAAGC
TTATGGGACATACCAAATGGATAAGATCAATTAGAATGGTGGGAGACACGGTGATAACAG
GTAGTGATGATTGGACGGCACGAATCTGGTCTGTTTCTAGAGGACAATGTGATGCAGTGC
TAGCTTGCCATGCTGGTCCAATTCTATGCGTGGAGTATTCCTCAGCGGACAAAGGGATAA
TAACAGGTTCAAGCGATGGTCTTCTGCGGTTCTGGGAAAATGATGATGGCGGCATAAGGT
GTATAAAGAATGTCACTATCCATACTGCCTCAATATTGTCCATTGATGCTGGGGAACACT
GGTTAGGAATAGGGGCTGCTGATAATTCAATGTCTCTCTTTCACCGTCCTCAAGAGAGGC
TAGGTGGCTTCTCTAGTGCTGGTTCAAAAATGGCGGGATGGCAGCTCTACAGAACTCCTC
AGAAAACAGCAGCAATGGTACGATGTGTGGCTTCTGATCTTGAAAGGAAAAGGATTTGTA
GTGGTGGACGCAATGGGTTGCTTAGACTGTGGGATGCTACTATAAACATCTAGGTTTTAA
GGGTGACTCCTGCATTTTCTTAGGGATTATGTGTATAAGTTTGCTCTATTTGGTTGCACT
AGTCACTACGTACATGCATTGTACATGTATCTTGTATAATTTGTACTCAAAATAGATTGG
ACTTTTAAGCTCGTGAAAATTCTT
|
| EST members of Unigene |
SRR015435.74122 SRR015435.151011 SRR015435.347383 AI490462 SRR015435.355339 BE435094 BP892200 AI484095 SRR015435.131506 SRR015435.359131 SRR015435.141191 SRR015435.347670 AI486219 SRR015436.273928 BP910818 BM411802 SRR015436.237879 AI487762 AI899340 AI485986 AI899327 SRR015436.280109 BP895582 AI487121 SRR015436.262476 BP892283 AI488090 BE435164
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10260 F-box and WD-40 domain protein 7 |
| EC |
|
| Transcription Factor Family |
C3H |
| Transporter Classification Family |
2.A.6 Resistance-nodulation-cell division factor superfamily RND |
| Probeset |
|
| Corresponding NCBI Gene |
841327
|
| Trichome-related Gene from Literature |
841327
|