| Acc. |
TCSP51098 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica E-value=2e-60; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, chloroplastic OS=Arabidopsis thaliana E-value=5e-58; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Protochlamydia amoebophila (strain UWE25) E-value=7e-41; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar copenhageni (strain Fiocruz L1-130) E-value=1e-39; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Leptospira interrogans serogroup Icterohaemorrhagiae serovar Lai (strain 56601) E-value=2e-39; |
| Length |
569 nt |
| Species |
Solanum pennellii |
| Belonged EST Libraries |
SRR027939 (4 ESTs); |
| Sequence |
AAAAGGGGACTAGGAGCTTGTATTCATAGATACATGTAATAAACCATGTTCTGCATTTTG
CATGATACATAAAATTCTACAACATATAAAAAGCTATAATATCTGCTGCTTGGAAATGGC
AGCTCACTGGAGTTGCTATGCTAGTTGTATTATTATCCAGTTGATATAATCTGCATCATT
TCCATTTCTTGAACTCGGCGATCTAGTCTTACTCCTCGGTAGGAGGATCAACCCAGCGGT
CATGATCTTTGATTAGCTGGATCAATGCATCCGTTGCATGCTCCATTTCAATAGCGCGTT
TTACCACCGTCTTGCCGACGTAAAGGTCAATCTTTCCAGGAGCACCACCAACATATCCAA
AGTCAGCATCAGCCATCTCCCCAGGTCCATTCACAATGCAACCCATGATGGCAATTGAAA
CACCAGGCAAGTGTGACGTCTTCTCTCTAATTTGAGCGCTTATCTCTTGAAGATCGAATA
AAGTTCTGCCACAGGATGGGCATGATACATATTCCGTTTTTGTGTTCCGCATTCTGCAAC
CTTGAAGCAAATTGAAAGATGTATTTCTT
|
| EST members of Unigene |
SRR027939.235740 SRR027939.189920 SRR027939.264152 SRR027939.148563 SRR027939.133707 SRR027939.251446 SRR027939.126296 SRR027939.260057 SRR027939.22711 SRR027939.103794 SRR027939.246068 SRR027939.44104 SRR027939.202994 SRR027939.258488 SRR027939.175564
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
|
| Corresponding NCBI Gene |
836181
|
| Trichome-related Gene from Literature |
836181
|