| Acc. |
TCSP54307 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, chloroplastic OS=Arabidopsis thaliana E-value=2e-56; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase, chloroplastic OS=Oryza sativa subsp. japonica E-value=3e-54; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Protochlamydia amoebophila (strain UWE25) E-value=1e-42; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Prochlorococcus marinus (strain SARG / CCMP1375 / SS120) E-value=5e-34; 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) E-value=1e-33; |
| Length |
344 nt |
| Species |
Solanum pennellii |
| Belonged EST Libraries |
SRR027939 (6 ESTs); |
| Sequence |
GGGGAATGGTGGAATCAGCATTTGAGTTTGCCAGAATTTGTAGAAAGTTGGACTTCCACA
ATTTTGTCTTCTCAATGAAAGCTAGCAATCCAGTAGTTATGGTTCAGGCGTATCGCCTTC
TTGTAGCTGAGATGTATGTTCAAGGATGGGATTATCCTTTACACTTGGGAGTTACTGAAG
CTGGTGAAGGTGAGGATGGAAGGATGAAGTCTGCAATCGGAATTGGCACACTTCTTCAGG
ATGGTTTGGGTGATACGATACGGGTTTCCCTAACTGAAGCTCCAGAGGAGGAGATAGATC
CCTGTCGACGATTAGCAGACCTTGGAAAAAGAGCAGCTGCGCTT
|
| EST members of Unigene |
SRR027939.336058 SRR027939.279936 SRR027939.118513 SRR027939.18993 SRR027939.192927 SRR027939.328374
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
|
| Corresponding NCBI Gene |
836181
|
| Trichome-related Gene from Literature |
836181
|