Location:
EST Analysis
> EST Library Details
| Library Acc. |
SL_ROOT_DEF |
| Name |
Solanum lycopersicum, roots,5-6 weeks old |
| Organism |
Solanum lycopersicum |
| Tissue |
roots |
| Stage |
5-6 weeks old |
| Description |
Vector: pBluescript SK-; Site_1: 5' EcoRI; Site_2: 3' XhoI; supplier: Tanksley; Tissue supplied by Dave Garvin (USDA-ARS, Ithaca, NY 14850). Roots were harvested from plants grown under the following deficiencies/stresses: 10 mM Al, Zn, P, K, Fe, N), and mRNA was isolated from indivdual treatments. Proportional aliquots of mRNA of each treatment were mixed and used for library construction. |
| # of EST/cDNA |
1007 |
| # of Unigene |
915;
Of them, 245 singletons and 670 TCs.
|
| Download (.zip) |
link |
| Release Date |
May 18, 2001 |
| Contact |
Contact: CUGI Clemson University Genomics Institute Clemson University 100 Jordan Hall, Clemson, SC 29634, USA Email: http://www.genome.clemson.edu/orders/index.html 5 prime sequence. |
| Citation |
Generation of ESTs from tomato nutrient-deficient roots
van der Hoeven,R.S., Garvin,D.F., Matern,A.L., Holt,I.E., Liang,F., Upton,J., Hansen,T.S., Ronning,C.M., Craven,M.B., Bowman,C.L., Nierman,W., Fraser,C.M., Venter,J.C., Martin,G.B., Giovannoni,J.J. and Tanksley,S.D.
Unpublished (1999)
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