| Acc. |
AF029984 |
| Internal Acc. |
|
| Type |
Singleton/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase COP1 OS=Pisum sativum E-value=0; E3 ubiquitin-protein ligase RFWD2 OS=Homo sapiens E-value=0; E3 ubiquitin-protein ligase RFWD2 OS=Mus musculus E-value=0; Protein SPA1-RELATED 4 OS=Arabidopsis thaliana E-value=6e-96; |
| Length |
2373 nt |
| Species |
Solanum lycopersicum |
| Belonged EST Libraries |
SL_CDS (1 ESTs); |
| Sequence |
ATACCCAATTTGCATTTGGGGGTATAGAGGGAGATGGTGGAAAGTTCAGTTGGAGGGGTG
GTGCCAGCAGTGAAGGGGGAGGTGATGAGGAGGATGGGGGACAAAGAGGAGGGGGGTAGT
GTAACTCTAAGGGATGAAGAAGTTGGGACAGTGACAGAATGGGAATTGGACAGGGAATTG
TTGTGTCCTATATGTATGCAGATCATAAAGGATGCATTTTTAACAGCTTGTGGGCACAGT
TTTTGCTATATGTGCATAGTTACTCATCTTCACAACAAGAGTGATTGCCCCTGTTGTTCT
CATTATCTCACTACCAGTCAACTCTATCCCAATTTCCTACTTGACAAGCTATTGAAGAAG
ACATCTGCCCGTCAGATTTCAAAAACTGCATCCCCTGTTGAACAGTTTCGTCATTCATTG
GAACAGGGTTCTGAAGTGTCAATTAAGGAGCTGGACGCTCTATTGTTGATGTTGTCAGAG
AAAAAGAGGAAATTGGAACAGGAGGAAGCAGAGCGAAATATGCAAATTCTGCTAGACTTC
TTACAGATGTTAAGGAAGCAAAAAGTTGATGAACTCAATGAGGTGCAACATGATCTGCAA
TACATCAAAGAGGACTTAAATTCAGTAGAGAGACATAGAATAGACCTATACCGGGCTAGG
GACCGGTATTCAATGAAGCTCCGAATGTTAGCAGATGATCCTATTGGGAAAAAACCTTGG
TCTTCATCAACTGATAGGAACTTTGGTGGTCTTTTCTCCACTTCACAAAATGCACCTGGA
GGATTACCGACTGGAAACTTGACATTCAAAAAGGTGGACAGCAAAGCTCAAATAAGCTCT
CCTGGACCACAGAGAAAAGATACTTCAATCAGTGAACTGAACTCACAACATATGAGTCAA
TCAGGTCTGGCTGTGGTTAGGAAGAAGCGTGTCAATGCACAGTTCAATGATCTCCAAGAA
TGTTACTTGCAAAAGAGACGTCAATTGGCAAACAAATCGCGAGTTAAGGAAGAAAAGGAT
GCAGATGTCGTACAAAGAGAAGGTTACAGTGAAGGACTAGCAGATTTTCAGTCTGTACTT
AGCACTTTCACTCGTTATAGTCGGTTAAGAGTCATTGCTGAACTTCGGCATGGGGATCTG
TTTCACTCGGCCAATATTGTTTCAAGCATTGAATTTGATCGGGATGATGAGTTGTTTGCT
ACTGCTGGAGTTTCACGGCGTATAAAAGTTTTTGACTTCTCTTCAGTTGTAAATGAACCT
GCAGATGCACACTGCCCTGTTGTTGAAATGTCTACCCGATCTAAGCTGAGCTGCTTGAGT
TGGAATAAGTATACCAAGAACCACATAGCTAGTAGTGATTATGATGGAATAGTAACTGTA
TGGGATGTGACGACTAGACAGAGTGTGATGGAATATGAAGAGCATGAGAAACGGGCTTGG
AGTGTTGATTTTTCACGCACAGAACCCTCGATGCTTGTATCTGGCAGTGATGATTGTAAG
GTCAAAGTTTGGTGCACGAAGCAGGAAGCAAGTGTTCTTAATATTGACATGAAGGCAAAT
ATATGCTGTGTAAAATATAATCCTGGATCTAGTGTTCATATAGCGGTTGGCTCTGCGGAT
CATCATATTCATTATTATGACTTGAGGAACACCAGCCAGCCGGTTCACATTTTTAGTGGC
CATAGAAAAGCTGTTTCATATGTAAAATTTTTGTCCAACAATGAACTTGCTTCAGCATCA
ACAGACAGTACTCTACGATTGTGGGATGTAAAAGATAATTTGCCGGTTCGCACGCTTAGA
GGACATACGAATGAGAAGAACTTTGTTGGTCTCTCAGTGAACAATGAATTCCTGTCATGT
GGCAGTGAAACAAATGAAGTATTCGTGTACCATAAGGCGATATCCAAACCCGTGACTTGG
CATAGATTTGGTTCCCCAGACATAGACGAAGCGGATGAAGATGCAGGATCTTATTTCATC
AGCGCAGTGTGCTGGAAGAGCGATAGCCCTACGATGCTAGCTGCTAATAGCCAGGGAACT
ATAAAAGTGTTAGTCCTTGCAGCTTGATGAAGTTAATAAAGCTACTAGTTAAGAATGTTC
AAATCTTTTTAGTGGAAAAACAGTGAAATGGAATTTCACATTCAATTTTTCCTGTAGATA
TCTATTCAACCATCAAGATGGCATGGTTCCCCCCATATTTGTCAATGTATTCATCATTAA
AACATGTAACACAAGTTGTAGGGCTTGGTAAATTTAGAAGAATTTTACAAGTTTGTGTTT
TTTTTTTCATTGTGCTGAAGGACATCGGATTTACACACCATTTCATGGAATAAACTTTAC
TCGTATTCAGTGTTTAAAAAAAAAAAAAAAAAA
|
| EST members of Unigene |
AF029984
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10143 E3 ubiquitin-protein ligase RFWD2 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
3.A.2 H+- or Na+-translocating F-type, V-type and A-type ATPase superfamily F-ATPase |
| Probeset |
|
| Corresponding NCBI Gene |
817857
|
| Trichome-related Gene from Literature |
817857
|