| Acc. |
AI488404 |
| Internal Acc. |
EST246726 |
| Type |
EST
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana E-value=3e-49; E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana E-value=1e-33; Probable E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens E-value=2e-23; Probable ubiquitin fusion degradation protein C12B10.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=5e-20; E3 ubiquitin-protein ligase HECTD1 OS=Homo sapiens E-value=5e-18; |
| Length |
396 nt |
| Species |
Solanum lycopersicum |
| Belonged EST Libraries |
SL_TAMU; |
| Sequence |
TTTTACCAGCCTGGCTATTCTGAATATATTCTTAAAGCAGGCGACGAGAATTAACTTGGA
GGAGTATATTTCTTTGGTAGTTGATGCTACTGTGAAAACTGGAATCAGGCAGCAAATGGA
GGCTTTTAGATCTGGCTTCAATCAGGTTTTCGACTTTTCAGCTCTGCAAATATTCTCTCC
TTCAGAGTTAGACTATCTATTATGTGGCCGTAGAGAGCTGTGGAAGCCTGAGACGCTAGT
AGATCACATAAAATTCGATCATGGATTCACATCCAAGAGTCCTCCTATTATTCATTTACT
AGAGAATATGGGAGAGTTCACACCTGAGCAGCAACGAGCATTCTGCCAGGTTGTTACTGG
TGCTCCTCGGCTTCCCGCAGGTGGTCTTGCTTCTCT
|
| EST members of Unigene |
N/A
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10590 E3 ubiquitin-protein ligase TRIP12 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
8.A.3 Cytoplasmic membrane-periplasmic auxiliary-1 protein MPA1 plus a cytoplasmic domain MPA1-C or MPA1+C |
| Probeset |
|
| Corresponding NCBI Gene |
830017
|
| Trichome-related Gene from Literature |
830017
|