| Acc. |
AW685226 |
| Internal Acc. |
NF027D05NR1F1000 |
| Type |
EST
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana E-value=2e-80; E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana E-value=2e-45; Probable E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens E-value=2e-26; Probable ubiquitin fusion degradation protein C12B10.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=1e-15; E3 ubiquitin-protein ligase HECTD1 OS=Homo sapiens E-value=6e-11; |
| Length |
639 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_NOD_ROOT; |
| Sequence |
GCCAGCTTTTCAAAGTGATTGAATATTTCCGGCTTTTAGGCCGCGTAGTTGCTAAAGCAC
CTTCAGGATGGACGTCTATTAGATTTGCCATTATCTGTAGCATTTTATAAGCTTGTTCTT
GGTCAAGATCTTGATTTGCACGACATTCTTTACGTTGACGCTGAACTTGGGAAAACTTTG
CAAGAGTTGAATGCCCTTGTTTGTCGGAAACATAATATTGAATCTATTGGTGGTGGTAAT
ACTGGTACAGTATCAAATTTGCATTATCGTGGAGCTCCAATTGCAGATCTCTGTTTGGAT
TTTACCCTTCCTGGTTATCCAGAGTATACCTTGAAACCTGGGGATGAAATTGTTGACCTC
AATAATCTAGAGGATTATATATCCATGGTTGTTGATGCCACTGTCAAGACTGGAATAACG
CGCCAACTGGAAGCCTTTAGAGCAGGGTTCAATCAGGTTTTTGACATCTCATCTTTACAA
ATATTTACGCCTCATGAATTGGATTATTTGCTTTGCGGCCGTAGAGAATTATGGAAGACA
GAGACACTAGCTGATCATATCAAAATTTGACCATGGGTACACTGCCAAGAGCCCCGCAAT
AGTGAATTTACTTGAAATTATNGGGAGAGTCACACCGGA
|
| EST members of Unigene |
N/A
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10590 E3 ubiquitin-protein ligase TRIP12 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
8.A.3 Cytoplasmic membrane-periplasmic auxiliary-1 protein MPA1 plus a cytoplasmic domain MPA1-C or MPA1+C |
| Probeset |
|
| Corresponding NCBI Gene |
830017
|
| Trichome-related Gene from Literature |
830017
|