| Acc. |
BG126089 |
| Internal Acc. |
EST471735 |
| Type |
Singleton/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana E-value=6e-92; E3 ubiquitin-protein ligase COP1 OS=Pisum sativum E-value=4e-88; E3 ubiquitin-protein ligase RFWD2 OS=Mus musculus E-value=8e-55; E3 ubiquitin-protein ligase RFWD2 OS=Homo sapiens E-value=8e-55; Protein SPA1-RELATED 4 OS=Arabidopsis thaliana E-value=9e-48; |
| Length |
708 nt |
| Species |
Solanum lycopersicum |
| Belonged EST Libraries |
SL_SHOOT_4WEEK (1 ESTs); |
| Sequence |
GGTTGACTTTTGTCGTACTGAACCTTCTATGCTTGTATCTGGTAGTGATGATTGCAAGGT
CAAAGTTTGGTGTACGAAGCAGGAAGCTAGCGTTCTTACCATTGACATGAAAGCTAACAT
TTGCTCGGTGAAGTATAATCCTGGATCCAGTGCTCACATAGCTGTGGGTTCTGCAGATCA
TCACGTTCACTATTACGACTTGAGAAATATTAGCCAGCCACTATACATTTTCAGTGGACA
CCGTAAAGCTGTTTCATATGTAAAATTTCTATCAAACTATGAGCTAGCTTCTGCATCAAC
CGATAGTACACTGCGTTTGTGGGACGTCAATGAGAATGTTCCACTGCGTACGTTTAAAGG
ACATACAAACGAGAAGAACTTTGTCGGTCTTACAGTAAACAGCGAATACCTTGCTTGTGG
AAGTGAGACAAATGAAGTCTTTGTCTACCACAAGGCGATTTCTAAACCAGCAGCTCGGTA
CAGATTTGTTTCTGATGATCAGAATGATCCAGACGGGGACATGGGATCATTTTTCAATCA
GTGCTGTTTGTTGGAAACGTGACAGCCCAACCATTGTTACAGCAAACAGTCGAGGGACAA
TAAAAGCACTTGTTCTTGCTGCTTGATCAAACAATCAAACTACACATGGATTTCTTGGCT
GCTTGATCAAACAATCAAACTACACATGGATCGATCCTATTGGAAATG
|
| EST members of Unigene |
BG126089
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10143 E3 ubiquitin-protein ligase RFWD2 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
3.A.2 H+- or Na+-translocating F-type, V-type and A-type ATPase superfamily F-ATPase |
| Probeset |
|
| Corresponding NCBI Gene |
817857
|
| Trichome-related Gene from Literature |
817857
|