| Acc. |
BI422937 |
| Internal Acc. |
EST533603 |
| Type |
EST
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana E-value=3e-69; Probable E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens E-value=9e-49; Probable ubiquitin fusion degradation protein C12B10.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=6e-27; Ubiquitin fusion degradation protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) E-value=8e-22; |
| Length |
765 nt |
| Species |
Solanum lycopersicum |
| Belonged EST Libraries |
SL_TAMU_CALLUS; |
| Sequence |
AGCACCTCTTGGATTATTCCCACGCCCTTGGTCATCAACTGTTGAAACTGCAGATGACAA
CCACTTCCCGAAGGTGATTGAATATTTCAGATTGCTAGGGCGTGTGATGGCGAAAGCACT
TCAAGATGGGCGGCTATTGGATCTTCCTCTGTCAACTGCATTTTACAAGCTTCTTCTTGG
CCAAGAGCTTGATCTGTATGATATTCTTTCTTTTGATGCTGAGTTAGGGAAGACTTTGCA
AGAGTTGCAAGCTCTTGTTAGCCGTAAACAAAATCTAGAATCAATTGGAGGCCAGGGCCA
AGAGAACATTAATGATCTGCATTTTCGTGGGATCCCAGTTGAGGATCTTTGTTTAGATTT
CACACTCCCAGGCTATCCTGAATATGTTCTGAAAGCAGGCAATGAGAATGTGGATCTCTG
TAACTTGGAAGAATATGTTACTTTGGTGGTTGATGCCACTGTGAGGACTGGAATTGGGCG
GCAGATGGAAGCATTTAGATCTGGATTCAATCAGGTTTTTGAGATTTCAGCTCTGCAAAT
ATTCTCTTCTACTGAGTTGGACTACCTGCTTTGTGGCCGTAAAGAGTTATGGAAGGCTGA
GACGCTTGTAGATCATATCAAGTTTGATCATGGATATACAGCCAAGAGTCCCGCCATCGT
ATATTTATTGGAGATCATGGGAGAGTTCACTCCTGAGCAGCAACGAGCATTCTGTCAGTT
TGTGACTGGTGCTCCCCCGGCTTCCCTCAGGTGGTCTGGGCGTGC
|
| EST members of Unigene |
N/A
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10590 E3 ubiquitin-protein ligase TRIP12 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
8.A.3 Cytoplasmic membrane-periplasmic auxiliary-1 protein MPA1 plus a cytoplasmic domain MPA1-C or MPA1+C |
| Probeset |
|
| Corresponding NCBI Gene |
830017
|
| Trichome-related Gene from Literature |
830017
|