| Acc. |
BM413069 |
| Internal Acc. |
EST587396 |
| Type |
Singleton/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana E-value=4e-72; Ubiquitin-protein ligase E3C OS=Homo sapiens E-value=2e-46; Ubiquitin-protein ligase E3C OS=Mus musculus E-value=1e-45; E3 ubiquitin-protein ligase UPL7 OS=Arabidopsis thaliana E-value=1e-41; Ubiquitin-protein ligase E3B OS=Xenopus tropicalis E-value=5e-41; |
| Length |
755 nt |
| Species |
Solanum lycopersicum |
| Belonged EST Libraries |
SL_breaker_fruit (1 ESTs); |
| Sequence |
CAGAATTGTATCGCCATCTCATCTTCCTGAAGCATTACGAAGGTGATGTTTCAGATCTTG
AGTTGTACTTTGTCATTCTCAACAATGAATATGGAGAGCAAGCGGAAGAAGAGCTGCTTC
CTGGTGGTAAAAGCACACGTGTTACTAATGAGAATGTCATCACCTTTATTCATCTTGTTG
CTAACCATCGTTTAAACTTTCAGATCCGTCAACAAAGTTCTCATTTTCTGAGGGGTTTCC
AACAGCTAATACAAAAGGAGTGGATTGACATGTTTAATGAACATGAACTTCAGCTTCTTA
TTTCTGGATCACTTGATGGCATTGATATTGATGACCTTCGAGCTCATACCAATTATACAG
GAGGTTACCACAAGGAACACTATGTTATTGATACGTTTTGGGAGGTTGTGAAAAACTTTT
CTTTGGAAAATCAGAGAAAATTTCTGAAGTTTGTGACTGGGTGCTCACGAGGACCCTTAC
TCGGATTTAAATATTTGGGAGCCGTTGTTCTGCATACAGAGAGCGGGTGGGCATGCTTCT
GATGAAGCTCTTGATCGTCTGCCGACATCAGCTACTTGCATGAATCTTTTAAAATTTCCA
CCATACAGAAGCAAAGAGCAGATGGAGCAGAAATTGTTATACGCCATAAATGCTGGATGC
TGGTTTTGATTTAAGCTGATGGAATTATCTGTGCATGCAATTTTGGAGTATCCGCTTTTT
ATCTGAAAGCAGCTTGTGTTCTTCATTGGCATAAA
|
| EST members of Unigene |
BM413069
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10589 ubiquitin-protein ligase E3 C |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
8.A.3 Cytoplasmic membrane-periplasmic auxiliary-1 protein MPA1 plus a cytoplasmic domain MPA1-C or MPA1+C |
| Probeset |
|
| Corresponding NCBI Gene |
820979
|
| Trichome-related Gene from Literature |
820979
|