Acc. |
FG183902 |
Internal Acc. |
AGN_PNL207br1_e1.trimmed.seq |
Type |
EST
|
Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana E-value=5e-62; E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana E-value=5e-44; Probable E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens E-value=5e-33; Probable ubiquitin fusion degradation protein C12B10.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=2e-26; Ubiquitin fusion degradation protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) E-value=3e-24; |
Length |
715 nt |
Species |
Nicotiana tabacum |
Belonged EST Libraries |
NT_AGN_PNL; |
Sequence |
CTTTTATCTGCGAGAAGCAAAGTGAAAAAAAAGGCCACACTATGCCCTTACATGTATGTG
CTGCACGACCTTAAAACGTCAAAATTGAAAGAACAATCTTCCTACATATTTACAAGCATT
TGCAGCATAGAACCCCCGCAGAAAAAATCTCCCATCATCACACGGCCGAAGCAAGGCTCC
AATGTCAGCTTGGTGTTGCTAGTTGAGCATGGGCCAGAGCCGCCTTTATTGAGGACCAGA
CACAACAATTTCACAGTTGTATTCACAAGTCCATTTGTCAGGTGACTTATGATAAATCAA
AGGATCCTTGGCCTTCATTGATCGCATAGAGTAACTTCTTGTACATGATTTCCTTAGTAG
AATAGGGAGGCAGTTTCAGGTAGTTAGCACATGTCATCACACTAGGTAGGTCATCATCTG
CAGATTCTGATGGCATATTACCATTTGATGCTGTATTACTAGCACTAGATGAATGCTTCC
TCACTATTGTCAACTTAGGATTGAGCACAGCCAGACCACCTGGAGGAAGCCGGGGAGCAC
CAGTGACAAACTGACAGAACGCTCGTTGCTGCTCAGGAGTGAACTCTCCCATGATCTCTA
GTAAATAAACAATAGCGGGACTCTTGGCTGTATATCCATGATCAAATTTGATATGATCTA
CAAGAGTCTCAGCCTTCCATAACTCTCTACGGCCACAAAGCAAGTAGTCCAACTC
|
EST members of Unigene |
N/A
|
InterProScan Domain |
|
Gene Ontology |
|
KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10590 E3 ubiquitin-protein ligase TRIP12 |
EC |
6.3.2.19 |
Transcription Factor Family |
|
Transporter Classification Family |
8.A.3 Cytoplasmic membrane-periplasmic auxiliary-1 protein MPA1 plus a cytoplasmic domain MPA1-C or MPA1+C |
Probeset |
|
Corresponding NCBI Gene |
830017
|
Trichome-related Gene from Literature |
830017
|