Detail of EST/Unigene TCHL53917
Acc. TCHL53917
Internal Acc.
Type TC/Unigene
Annotation (Top 5 hits in Uniprot_trembl) Serine hydroxymethyltransferase, mitochondrial OS=Solanum tuberosum E-value=0; Serine hydroxymethyltransferase, mitochondrial OS=Arabidopsis thaliana E-value=0; Serine hydroxymethyltransferase 1, mitochondrial OS=Flaveria pringlei E-value=0; Serine hydroxymethyltransferase, mitochondrial OS=Pisum sativum E-value=0; Serine hydroxymethyltransferase 2, mitochondrial OS=Flaveria pringlei E-value=0;
Length 1920 nt
Species Humulus lupulus
Belonged EST Libraries SRR546165 (86 ESTs); SRR546168 (42 ESTs); SRR546172 (17 ESTs); SRR546170 (10 ESTs); HLUTR3CH (2 ESTs);
Sequence GGAGGGAGAGAGAGAGAGTGTGTGTGTTTGAGAGAGAAGAAAAAAAAAAGATGGCCATGG
CATTGGCGCTGCGGAGGCTCTCTTCTTCTGTTGACAAGTCCGTCCGTCCACGCATTAATG
GAGGCTCGCTTTATTATATGTCGTCTCTTCCAAATGAAGCTGTGTACGAGAAAGAGAAAA
ATGGTGTTTCGTGGACTAAACAGCTGAATGCTCCGTTGGAAGCTGTCGATCCAGAAATTG
CAGACATCATTGAGCACGAGAAAGCTAGGCAATGGAAGGGGCTAGAACTCATACCCTCCG
AGAATTTCACTTCAGTCTCTGTAATGCAAGCTGTTGGTTCTGTCATGACAAACAAATACA
GTGAAGGATATCCCGGTGCTAGATACTATGGAGGAAATGAGTTCATTGATATGGCAGAAA
CCTTGTGCCAGAAGCGTGCTTTGGAAGCTTTTCGGTTGGATCCAGAGAAATGGGGAGTGA
ATGTCCAGTCCCTGTCAGGATCTCCGGCTAATTTTCAGGTGTACACTGCATTGCTAAAAC
CTCATGAGAGAATCATGGCACTTGATCTTCCTCATGGTGGACATCTTTCTCATGGGTACC
AGACTGATACCAAAAAGATATCTGCTGTGTCTATTTTCTTTGAGACAATGCCGTATAGAT
TGGATGAGAGCACTGGATATATCGACTATGACCAGATGGAGAAAAGTGCCACATTATTCA
GGCCAAAATTAATAGTTGCTGGTGCTAGCGCGTATGCACGTCTGTATGACTATGACCGTA
TCCGCAAGATCTGCAACAAACAAAAAGCCATAATGTTGGCAGATATGGCACACATCAGTG
GATTGGTTGCTGCTGGTGTCATCCCATCACCTTTCGACTATGCAGATGTAGTAACCACCA
CAACTCATAAGTCACTTCGTGGACCTCGTGGAGCCATGATTTTCTTCAGGAAGGGAGTGA
AAGAGATCAACAAACAAGGAAAAGAGGTGTTGTATGACTATGAAGACAAAATTAATCAGG
CTGTCTTTCCCGGACTTCAAGGTGGTCCACACAACCACACAATTACTGGTTTGGCAGTAG
CATTGAAACAGGCTACAACTCCAGAATACAAGGCCTATCAGGAGCAGGTTCTCAACAATT
GCTCAAAATTTGCACAGTCTCTGGCTGAAAGGGGCTATGAGCTTGTTTCTGGTGGAACTG
ATAACCACTTAGTCTTGGTTAACTTGAAAAAGAAGGGTATTGATGGCTCCAGAGTTGAGA
AGGTTTTGGAATCTGTTCACATTGCTGCTAACAAAAATACTGTTCCTGGAGATGTGTCAG
CCATGGTTCCTGGTGGTATTAGGATGGGAACCCCAGCTCTTACTTCAAGAGGATTTATTG
AGGAAGATTTTGCCAAGGTTGCGGAATTCTTTGATGCTGCTGTGAAATTGGCCTTGAAAA
TCAAGGGAGAAGCAGCAGGTACAAAGTTGAAGGACTTTGTGGCCACCTTGCAGGCCCCCC
ACATCCAATCTGAGGTTGCAAAGCTCAAACATGATGTGGAAGAGTATGCCAAGCAGTTTC
CTACAATTGGGTTTGAGAAGGAAACCATGAAGTACAAGAATTGAGGGAGACATCTTCCTG
TTCTAGAACACAGGCACTGTAAGCAGACGTGAAGAGGAGTTTTCCCATTTGACAAATGAG
AAGGACCATATGCGAAGGAGTATGATCTAGAGCTTTTATACCTACAGATCTAGGATATCT
CAATTTGGTTCTTCAAGAAATATATGTAAATACTATTTGAGGCCATGTAATGCAATAAAA
CTACTTATAAAAACAACACAACTACTCTTTTATCTCTTTTCTTTCATTTTATGTGATATG
ATGGCGTAGCAAACTCTCTTAATTTTTCCAATAAAAGCAAAATCCTGCCAGTGCTCAAAC
EST members of Unigene SRR546172.146713  SRR546168.129064  SRR546165.233414  SRR546168.74180  SRR546168.111854  SRR546165.140460  SRR546165.166161  SRR546165.74362  SRR546165.148005  SRR546165.100268  SRR546168.135257  SRR546170.19692  SRR546165.286563  SRR546165.195539  SRR546165.101234  SRR546168.68586  SRR546165.162499  SRR546165.168875  SRR546165.117256  SRR546168.73401  SRR546165.282487  SRR546165.50188  SRR546168.40154  SRR546172.57607  SRR546165.84205  SRR546165.172515  SRR546165.227983  SRR546168.102756  SRR546165.64877  SRR546165.183342  SRR546165.200544  SRR546168.101992  SRR546170.121491  SRR546170.113185  SRR546165.285772  SRR546168.73593  SRR546168.98130  SRR546165.227223  SRR546165.318603  SRR546165.184725  SRR546168.50853  SRR546172.76806  SRR546165.122340  SRR546165.109395  SRR546165.39450  SRR546168.103409  SRR546172.85312  SRR546165.239462  SRR546170.153252  SRR546165.128152  SRR546165.1354  SRR546165.67473  SRR546165.255898  SRR546165.322562  SRR546165.13753  SRR546168.66718  SRR546168.59569  SRR546165.320996  SRR546165.222255  SRR546168.26113  SRR546165.201347  SRR546168.129277  SRR546165.277498  SRR546172.7789  SRR546165.204640  SRR546168.63777  SRR546168.122901  SRR546172.26936  SRR546165.3653  SRR546165.321948  SRR546165.237505  SRR546168.33067  GD251122  SRR546172.69070  SRR546165.32675  SRR546165.135090  SRR546170.130816  SRR546172.95968  SRR546168.9239  SRR546170.78880  SRR546168.71578  SRR546165.280471  SRR546172.107206  SRR546168.41052  SRR546168.125876  GD249493  SRR546165.214190  SRR546165.114281  SRR546165.211871  SRR546165.85492  SRR546165.241058  SRR546172.29720  SRR546165.273720  SRR546165.292846  SRR546165.145215  SRR546172.42483  SRR546165.156227  SRR546170.134349  SRR546165.102482  SRR546168.116398  SRR546165.210677  SRR546170.109989  SRR546172.73362  SRR546168.81802  SRR546168.75229  SRR546170.91252  SRR546172.121101  SRR546165.212816  SRR546165.56095  SRR546165.265775  SRR546165.80836  SRR546165.322778  SRR546165.160649  SRR546165.208957  SRR546168.132246  SRR546168.34861  SRR546165.83550  SRR546165.25979  SRR546165.259475  SRR546168.67561  SRR546172.77475  SRR546165.46494  SRR546168.89399  SRR546165.239358  SRR546168.35494  SRR546168.113552  SRR546172.164440  SRR546165.161484  SRR546165.85924  SRR546165.268548  SRR546168.132886  SRR546165.286324  SRR546168.52313  SRR546168.95015  SRR546165.166712  SRR546165.137340  SRR546168.97313  SRR546168.72196  SRR546165.58657  SRR546168.6102  SRR546172.170018  SRR546165.28885  SRR546165.243389  SRR546165.65401  SRR546165.324160  SRR546165.263101  SRR546170.60185  SRR546172.34374  SRR546165.70046  SRR546165.223895  SRR546168.73156  SRR546165.10534  SRR546165.175371  SRR546165.263307  SRR546165.31989  SRR546168.82811  SRR546168.79717 
InterProScan Domain  
Gene Ontology  
KEGG Orthology Metabolism > Energy Metabolism > ko00680 Methane metabolism > K00600 glycine hydroxymethyltransferase;
Metabolism > Amino Acid Metabolism > ko00260 Glycine, serine and threonine metabolism > K00600 glycine hydroxymethyltransferase;
Metabolism > Metabolism of Other Amino Acids > ko00460 Cyanoamino acid metabolism > K00600 glycine hydroxymethyltransferase;
Metabolism > Metabolism of Cofactors and Vitamins > ko00670 One carbon pool by folate > K00600 glycine hydroxymethyltransferase
EC 2.1.2.1 
Transcription Factor Family
Transporter Classification Family
Probeset
Corresponding NCBI Gene 829949 
Trichome-related Gene from Literature 829949