| Acc. |
TCHL55288 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 OS=Gossypium hirsutum E-value=0; 3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 OS=Gossypium hirsutum E-value=0; 3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Camptotheca acuminata E-value=0; 3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Nicotiana sylvestris E-value=0; 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 OS=Solanum tuberosum E-value=0; |
| Length |
1339 nt |
| Species |
Humulus lupulus |
| Belonged EST Libraries |
SRR546165 (33 ESTs); SRR546170 (28 ESTs); SRR546172 (11 ESTs); HL_TRI (1 ESTs); HLUTR3CH (1 ESTs); |
| Sequence |
CTGCAAAGCCATTCATCTCTCCGGTGGAGCTTTCAGTGTCTTGTTGAAAGATGGCATGAC
TAGAGCTCCCGTGGTAAGGTTCAACACCGCCAGAAGAGCCGCTGATTTGAAGTTCTACTT
GGAAGAGCCTGCTAATTTCGAAACTCTCACCATGGTTTTCAACAGATCGAGCAGGTTTGC
GAGATTACAGACGATAAAATGCACGATTGCAGGGAAGAATCTTTACATGAGATTTTGCTG
CAGCACAGGAGACGCCATGGGAATGAACATGATATCCAAAGGTGTCCAAAACGTGCTTGA
TTTTCTCCAAAATGATTTCCCCGACATGGACGTGATTGGAATCTCCGGTAACTTCTGCTC
CGACAAGAAGCCCGCGGCCGTGAACTGGATCGAAGGGCGTGGTAAATCCGTGGTCTGTGA
AGCCACCATCAAGGGCGACGTAGTGAGGAAAGTATTGAAGACCAATGTGGAAGCACTTGT
CGAGCTCAACATGCTTAAGAACCTCACGGGTTCAGCCATGGCTGGTGCTCTTGGGGGTTT
CAACGCCCACGCAAGTAACATAGTCTCGGCAGTCTTCATCGCCACCGGCCAAGACCCTGC
GCAAAACATCGAGAGCTCCCATTGCATAACGATGATGGAGCCAGTCAACGATGGGAAGGA
TCTTCATGTTTCTGTCACTATGCCATCCATTGAGGTTGGTACAGTTGGAGGTGGAACTCA
ACTGGCGTCGCAGTCAGCTTGCTTGAATTTGCTCGGTGTGAAGGGCGCAAACAGAGAAGT
TCCAGGGTCAAATGCAAGAAAGTTGGCCACCATTGTTGCAGGTGCTGTGCTTGCTGGTGA
GCTTTCTCTCATGTCAGCTCTCGCAGCTGGCCAACTCGTTAACAGTCACATGAAGTACAA
CAGAGCAAACAAAAACGTTACTACTACTGCTACTCCTACTCCTACAGTTGCTTCATCTTA
AGAGCTAAGGGATTATTATTAGTATCATTAATTATAATTATTTTCTAAAATTCCCCAAAA
AAGTTAATAAATAATTTAAGAAAGTCAACTCACGTCATGGGGAGAATGAAAAGAATTGAT
GGTGATAGAAAATATCGAAGAACATAAATACTTATATAGACCACTAAGCTCACCTTACCT
AGCTAGCTAGGTGAAACCAAATTGTGTACTACTTGAACTTGTATTCTTTTTTTCTTTACT
TTACCTTTTTATTTTCCTCTACTTCGCCCATAAACCTTTTGATGCTGTACTTGTAAGAAT
TGTGTAAAAATGATGATGGGAAACTTGTAATTGTTGCTTTCACAGATGTTCTCGTAAGGG
AACATGGCCATGTTTTAGA
|
| EST members of Unigene |
SRR546170.132504 SRR546170.36878 SRR546172.144770 SRR546165.184900 SRR546165.265491 SRR546165.179493 SRR546172.116183 SRR546165.6132 SRR546165.65658 SRR546165.205372 SRR546170.80723 SRR546165.311459 SRR546165.119950 SRR546170.130950 SRR546170.133060 SRR546165.196661 SRR546170.134407 SRR546172.55707 SRR546170.86545 SRR546170.62397 SRR546170.116543 SRR546165.54333 SRR546172.33336 SRR546165.170653 SRR546165.158671 SRR546165.23392 SRR546165.170835 SRR546172.1221 SRR546170.97580 SRR546165.122901 SRR546170.156509 GD251931 SRR546165.322715 SRR546170.79985 SRR546165.252175 SRR546170.120935 SRR546170.2561 SRR546165.287014 SRR546165.320868 SRR546165.67906 SRR546170.41047 SRR546170.102863 SRR546170.107696 SRR546165.213606 SRR546172.50968 SRR546165.215728 EX520007 SRR546165.130499 SRR546170.77156 SRR546170.58991 SRR546165.291076 SRR546165.212231 SRR546165.188264 SRR546172.126110 SRR546165.64043 SRR546165.75451 SRR546165.40871 SRR546165.142359 SRR546170.73362 SRR546170.75290 SRR546172.5403 SRR546170.14038 SRR546170.136521 SRR546165.154330 SRR546170.124353 SRR546170.85126 SRR546172.97771 SRR546170.94961 SRR546165.58067 SRR546170.106175 SRR546172.26262 SRR546165.161079 SRR546170.60782 SRR546172.100087
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Metabolism > Lipid Metabolism > ko00100 Biosynthesis of steroids > K00021 3-hydroxy-3-methylglutaryl-CoA reductase |
| EC |
1.1.1.34 |
| Transcription Factor Family |
|
| Transporter Classification Family |
2.A.6 Resistance-nodulation-cell division factor superfamily RND |
| Probeset |
|
| Corresponding NCBI Gene |
843982
|
| Trichome-related Gene from Literature |
843982
|