| Acc. |
TCHL56956 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. japonica E-value=4e-67; Pleiotropic drug resistance protein 3 OS=Oryza sativa subsp. indica E-value=4e-67; Pleiotropic drug resistance protein TUR2 OS=Spirodela polyrrhiza E-value=6e-67; Pleiotropic drug resistance protein 1 OS=Nicotiana plumbaginifolia E-value=6e-67; Putative pleiotropic drug resistance protein 7 OS=Oryza sativa subsp. japonica E-value=2e-66; |
| Length |
1135 nt |
| Species |
Humulus lupulus |
| Belonged EST Libraries |
SRR546165 (11 ESTs); SRR546168 (3 ESTs); SRR546172 (3 ESTs); HLUPJN1 (1 ESTs); HLUTR3CH (1 ESTs); SRR546170 (1 ESTs); |
| Sequence |
GATAGACACACTTTATTTGGGATCAAAAGATAAATTATAGCGTATCTATTAGGATATCGC
AAGCTATATGTATAGGGAACGACTATAATGAATTCTTTTTTTGTAACACCGGTATATCTT
TTTTCTATTTCGGCACCTGGATAGATATAATCCTAAATTTTTTTATATGACGGTGTACAT
TGTAGGTATTTAGAATATCCTGCAAATTTTCAGGAAATTCTGAATAGTTTATAAAGCCGA
AAACAGAGTTCAAACTATCAAATTTTACACGCGTACACAAAAAAACAAGCACGCATGCAA
CAGAGAGTTTAGATCTTGTTTCGGTACCATAATTTATTCAGAATTTCTTGAAAATTTGTA
GAATGTTCTAGATAGCTATAATGTACACTATCATATAAAAATATTTGGGATTATAACTAT
TCAAGTACCACCGAAATAGAAAAATAATATATTGGTGTTGCAAAAAAAGATGTGTTGAAG
TAGCTTCGAGTATATATATTAATATAAATCTATCGCTTTTGAAAATTCAAGAACTTAATA
GAAAAGGCAAAGATGGTTCCAAAGAGCAGAGCAAACAAAACATTGACGAAGGCAACAACT
CCTAAGAAATCATGCCTGAAGCCAAAATAGCTTCTCAAGTATTCTTTCACTGTTTGTCCT
GTCTCAGCGTTGATCACATCTTCCACATCTCCAAACTGTGATACCAACAGTCCATATAGG
GTCCATGCTATTGGACATGCCCAGTAGTACCACCTCCACCATATTGGTATCCTAGTTCGA
GGGACGATGAATCCTGAGAAAAGGTTCCATATTGAGTAGAAGGCAGACGAAATAATGGAA
GCGACGTGATTATTGGGAGTGATTCCAACGGCCATCATGCCATAGAAAGTGTAGTAAAGC
ATTGAAAAGAAGGAGAAGAAGAAATACCAAAAGAACTTTTTGGCAGTCCATTCGAAGCCC
ATCATTGAGTACACTATCAAACAATAAACTACGGCTTGACAGAAAATGTATGGAATCTCG
ACTACCACCTGTCCGAATGTATAAGGAAAAGCTGAATACATTCCTGCAGCTTTTTCTCTA
TAAAAGACTGTTCTTTCTACGTCGACTACTGGCTGTACAGATCCAGCATTTTGGA
|
| EST members of Unigene |
SRR546165.68402 SRR546165.257982 SRR546165.66093 SRR546168.75960 SRR546165.21269 SRR546168.105335 GD252567 SRR546165.130868 SRR546170.11449 SRR546172.69053 SRR546165.58144 SRR546168.98213 SRR546172.83810 SRR546165.195052 SRR546165.107727 SRR546165.276252 GD244591 SRR546165.12299 SRR546172.41960 SRR546165.47302
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Environmental Information Processing > Membrane Transport > ko02010 ABC transporters > K05680 ATP-binding cassette, subfamily G (WHITE), member 4;
Environmental Information Processing > Membrane Transport > ko02010 ABC transporters > K05684 ATP-binding cassette, subfamily G (WHITE), member 8 (sterolin 2) |
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
3.A.1 ATP-binding-cassette superfamily ABC ABC-type importers (all from Bacteria and Archaea) |
| Probeset |
|
| Corresponding NCBI Gene |
838122
|
| Trichome-related Gene from Literature |
838122
|