Detail of EST/Unigene TCHL57985
Acc. TCHL57985
Internal Acc.
Type TC/Unigene
Annotation (Top 5 hits in Uniprot_trembl) E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana E-value=1e-95; E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana E-value=4e-59; Probable E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens E-value=1e-46; Probable ubiquitin fusion degradation protein C12B10.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=1e-39; Ubiquitin fusion degradation protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) E-value=3e-35;
Length 1039 nt
Species Humulus lupulus
Belonged EST Libraries SRR546165 (21 ESTs); SRR546168 (12 ESTs); SRR546172 (10 ESTs); SRR546170 (9 ESTs); HLUTR3CH (1 ESTs);
Sequence CATAACGAAATATTTCAAATGTTGGCTCTTTCTTCCCTTTCATCATTTATGCAAATACAT
GTATATTCTACCAGCCAAGTGAGTTGACCAAAGAAAAAAAGAACGAAAAATAAAACCCAT
AAATTCCTATTTTATTTACAAGCAGCAACTCCTGCAATGCAGCCGGAAAAGAAAGACATG
AAAAAGAAAAAAAGTGCTTGTGGATTTTCCTTTACAGCCTCTTATAAGAATGTGGTTGTT
GTCCAACTAACCTTGATAAAGGCACTAGAGCTTACGAGGTCACCAAAAGAAGCCTTTTAT
TATTTAGCAAGTAGGACTCTCTACTTTTCAATTTCAACATCAAAATTATCCCAGAAGGCA
AGGGGAAATGACCCGGATTGTTGTGGTGTAATATACACAGGTAAAATGAGTTAGCCCAAA
ATCTCATCAGGACAAATCAAAGGATCCTTGCCCTTCACTGATTGCATAGACTAGTTTCTT
GTACATGATTTCCTTGGTAGAGTAAGGAGGAAGCTTCAAGTAATTAGCACATGTCATGAC
ACTAGGTAAATCATCATCTGCTGATTCTGAAGGCCCTGTTCCATTAGATGCTGCATTACT
TGGAGAGGAGGAATGCTTTCTGACAATGGTGAGTTTCGGATTTAAGACTGCTAGACCACC
CGGTGGAAGCCTAGGTGCACCAGTGACAAACTGGCAGAAGGCCCGCTGCTGTTCAGGTGT
GAACTCTCCCATAATCTCAAGCAAATTCACAATTGCAGGACTCTTGGCGGTGTAACCATG
ATCGAATTTGATGTGATCAGAAAGTGTTTCCGCCTCCCACATCTCTCTACGCCCACAAAG
TAGATGGTCCAACTCATACGGTGTGAATATTTGTAAAGATAAGATGTCAAATACCTGATT
GAAACCCGCCTTAAATGCTTCCAATTGCCGCATGATTCCAGTCTTGACTGTTGCATCAAC
AACCAAGGATATGTATTCTTCCAAGTTGTTAATATCAACATTTTCATCTCCTCCTTTCAG
CACATAATCTGGAAAGCCA
EST members of Unigene SRR546165.5581  SRR546168.74013  SRR546165.167350  SRR546168.106667  SRR546168.27070  SRR546170.84235  SRR546168.101830  SRR546172.154257  SRR546165.197477  SRR546170.373  SRR546170.96195  SRR546165.322885  SRR546172.88580  GD251411  SRR546168.93377  SRR546165.314825  SRR546168.114239  SRR546165.107084  SRR546168.134916  SRR546172.65999  SRR546170.68235  SRR546165.250663  SRR546165.160032  SRR546165.320807  SRR546170.89672  SRR546170.37729  SRR546165.137369  SRR546170.49907  SRR546172.145100  SRR546172.163262  SRR546165.162042  SRR546168.2623  SRR546165.195846  SRR546170.68671  SRR546172.106046  SRR546165.324336  SRR546165.116198  SRR546172.117241  SRR546172.128819  SRR546168.91130  SRR546172.127912  SRR546168.56016  SRR546165.285970  SRR546165.301614  SRR546168.103728  SRR546168.20256  SRR546170.121095  SRR546165.133475  SRR546172.138759  SRR546165.43229  SRR546165.274539  SRR546165.208046  SRR546165.237809 
InterProScan Domain  
Gene Ontology  
KEGG Orthology Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10590 E3 ubiquitin-protein ligase TRIP12
EC 6.3.2.19 
Transcription Factor Family
Transporter Classification Family 8.A.3 Cytoplasmic membrane-periplasmic auxiliary-1 protein MPA1 plus a cytoplasmic domain MPA1-C or MPA1+C
Probeset
Corresponding NCBI Gene 830017 
Trichome-related Gene from Literature 830017