| Acc. |
TCMT47431 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
U-box domain-containing protein 17 OS=Arabidopsis thaliana E-value=0; U-box domain-containing protein 4 OS=Oryza sativa subsp. japonica E-value=0; U-box domain-containing protein 16 OS=Arabidopsis thaliana E-value=2e-87; U-box domain-containing protein 13 OS=Arabidopsis thaliana E-value=1e-83; U-box domain-containing protein 14 OS=Arabidopsis thaliana E-value=7e-79; |
| Length |
2709 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_JCVI-MT1 (3 ESTs); MT_CDS (2 ESTs); MT_MGHG (1 ESTs); MT_Drought (1 ESTs); |
| Sequence |
GAGCCGAAATTTTTTCTTCTCAATCTTAATCTTTTTTCCATCTTTATCTATTTGTTCTTC
TTAACCCTTTCAAATATTCAAACATAACTGTTTCATAGTCTTTCTTACCTGTTTCCTATG
TTATTCTTTGCAAAAATTTCCCACAAAAGAAATTTCCGCAGATCTGTCGGAAAATTTGCC
AAGATTGTTCCTTTTTACCATAAAAGTGTTTAGTTTCCATAATTATCATCTGGGTTTTCA
AGATTTTTTTTCTTTTAAGAGTGGAATTTCAAAAGGGGTTTCAGAAACCCTAGAATTTTC
ATTTTGTGATTGAAATGGCTTCAGGGGCAATTTTCTCATCGCTGCGGCGGCGAAGATCAC
CAACGTTGGAAGCTTTTCTCGCTCCGGTTGATTTAAGTGACGTTGCTTTGGTTCAAACCC
TTGTAACGGTTGTGAATGAGCTTGTGTGTTGTTTTTCAAAGCGTTCATTTTTCTTTCAGA
GGAAAAATACACGTTCTTTAATTAGAAAAGTTGAGGTTTTTCAGGTTCTGTTGGAGTATT
TGAATGATTCTGGTTCGGGTTCAGGTTCGGTTCTTCCGGCTACTGGGTTGCTTTGTCTGA
AAGAGCTTTATTTGTTGCTGTATAGGTCAAAGATTCTGCTTGATTATTGCGCGCAATCGA
GTAAGTTGTGGCTTTTGCTTCAAAATCATTCGATTTCGGGTCATTTTCATGATTTGAATC
AAGAGATTTCGACACTTTTGGATGTTTTTCCTGTTAAGGATGTTTGTTTGAGTAAGGATG
TTAGGGAACAGATTGAGCTTTTGTTGAAGCAATCAAGGAGGGCTAAGCTTTTTATTGATA
TGGAGGATGATGCTCTTAGGGTTCGTTTCTTTGAGTTTCTTGATCAGTTTGAGAATGGGA
GGATTCCTGATTCGGAAGAATTGCGAAGTTTTTATGTTGATAAGTTGCAGATTATGGATG
CTGCTTGTTGTAGAACTGAAATTGAGGCTTTGGAGGAGCAGATTGTTAACCATGAGGGTG
ATATTGAGCCTACAGTTTCTGTGCTTAAAGGGTTGGTGGCCATGACGCGGTATTGTAGGT
TTTTGATATTTGGATTTGAGGAAGATGAGCTTGATATGGAAAATGGAAGTCAGAAGAAGA
TCAAGAAGGGTTTGATTACTCAAGAAATTGCTGATACATTTTTAACTGTTCCAAAAGACT
TTTGTTGCCCGATATCATTGGATTTGATGAGAGATCCAGTGATTATTTCCACCGGTCAAA
CTTATGATAGGAGCTCCATTTCTAGGTGGATGGATGAAGGGCATACAACTTGCCCAAAGA
CAGGTCAAACGCTTGCTCACACTCGTCTTGTCCCGAATCGTGCCTTGAGGAATTTGATTG
TGCAGTGGTGTAGTGCTCATGGAATTCCCCTTGAACCACCAGAGGTGATGGAAGCAATGG
GTGAAGCTTTTGCATCTGCTTGTCCCACCAAAGCTGCTCTTGAAGCCAATAGAGCAACTG
CAAATCTTCTCATTCAACAGCTGGCTAATGGATCACAATCTGGAAAGACTGTAGCTGCTA
GGGAGATTCGATTGCTTGCGAAAACTGGCAGAGAAAATCGCGCTTTCCTTGCAGAAGCGG
GGGCAATTCCTTATCTTAGGGACTTGCTTTCGTCGCCTAATTCTGTTGCTCAGGAGAACT
CAGTTACTGCATTGCTCAATCTTTCCATATATGACAAGAACAAAAGCCGGATCATGGACG
AGGCAAGTTGTCTTGTATCAATTGTTAATGTTTTGAGATTCGGGCATACAACAGAAGCAA
GGGAAAATGCTGCTGCAACGTTGTTCAGCTTATCAGCAGTTCATGACTATAAGAAGATAA
TCGCGGACGAGACCGGAGCTGTTGAAGCCCTAGCAGGGCTGTTACAAGATGGGACTCCAA
GAGGAAAGAAAGATGCAGTAACAGCTTTGTTCAATCTTTCCACACACACCGATAATTGTG
TTAGAATGATTGAGGCAGGAGCAGTAACAGCTCTAGTTGAGGCTTTAGGGAATGAAGGAG
TTGCCGAGGAAGCAGCGGGTGCCATAGCCTTGATTGTTCGACAGCCTTTCGGAGCCAAAG
CATTAGTGAATCAGGAAGAGGCAGTAGCTGGATTGATAGGAATGATGCGTTGTGGAACAC
CGAGGGGTAAGGAGAATGCAGTCGCAGCATTGCTCGAGTTATGCCGGAGTGGAGGTTCAG
CTGCAACTGAAAGGGTAGTTAAGGCACCAGCTATTGCCGGATTACTTCAAACCCTATTAT
TTACCGGGACAAAGCGAGCTAGACGTAAAGCCGCTTCACTTGCTAGAGTGTTTCAGAGAT
GTGAAAATGCATCTCTGCATTACGGTGGATTAGGTGTAGGCTATGCATTTGCTAGCAATT
CAGCTCAAACTAGAGATTCAAGCTTTGCTGCAGGGGATGTTTCAGTACCAATGTCAATCT
CTGTACCTGTAATATAGTGGTATAATACTTTTTCTGTATTTGTAATTGTTACGTTCACAA
TTTTTATTGGAAGTTTTTACAGATTCTTTAATTGAAACTTTATAAAGTCATAAAAAAATG
TCACCAATACCATATGTATTCTCTTCCAAGAGATACATGAATGTTGTTGACAAGTTAGTT
CATCACATGTGTGACGTTGAGTTATATCAAAGACAGAAAAGAGAATGCTCTACAAAAGAG
TTTTAGACC
|
| EST members of Unigene |
BT051069 BT053191 EV262451 EV258540 EV257573 BE941205 BF631979
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K09561 STIP1 homology and U-box containing protein 1 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.39500.1.S1_at, Mtr.5477.1.S1_at
|
| Corresponding NCBI Gene |
839808
|
| Trichome-related Gene from Literature |
N/A
|