| Acc. |
TCMT51459 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana E-value=4e-42; Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana E-value=2e-39; E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana E-value=2e-27; E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana E-value=1e-26; E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana E-value=1e-26; |
| Length |
700 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_NOD_ROOT (1 ESTs); MTAMP (1 ESTs); MT_JAS_ROOR (1 ESTs); |
| Sequence |
AAGAAACAAAAATCTTAACGATTTCGAAACAGAAGAAACAACAACGTTGTTGTGTTGGTC
AACTCAACAACATCATCCATAATCGATACCAACAAAGACACACTTTTTTTCAATATAAGG
CATGCTTTTTTTTCTTGATTCGCTGGATCTTGGTGAGCACTGCCAAAAATAGTTATTTCT
TACATGTTAAGTGTTGGCCAGAGACTTTTGTGCTTGAATGTAGCTTACTCGTGCTAGATT
ATCTTAGGGAAACTCTATAAGTTGTAGCATGCCACAAATATAAACTCAAAGCTAAAGAAA
TTGGAAAGAAAACCTTTAGATCGGATCAGAAATGGCTCCTGGAGGAGGTATTTTCAAAGA
AGTTCTCGAGTCTCACCTCTTGACTTCAGATTATGAAACAGGCAAGGCTAAATCTGAGGC
CAAGATTAACAGTACACTTACAAAATCCACTAGTGTTGGATTGAATGGAAAGCACGGAAC
TAGTTCAAAGAATGGTGTGCATGATTTACTCGGGTGCCCTGTCTGCAAGAATTTGATGTA
TCCTCCAATTTACCAGTGTCCAAATGGCCATACATTATGTTCAAATTGTAAGATTGAAGT
CCATAATCTCTGTCCCACCTGTCACCATGATCTTGGGAATATAAGGTGTTTGGCTCTGGA
GAAAGTGGCGGAATCTTTGGAGCTTCCTTGCAGATATCAA
|
| EST members of Unigene |
AW685909 AJ504343 CX528659
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K04506 E3 ubiquitin-protein ligase SIAH1;
Environmental Information Processing > Signal Transduction > ko04310 Wnt signaling pathway > K04506 E3 ubiquitin-protein ligase SIAH1 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.13417.1.S1_at
|
| Corresponding NCBI Gene |
824973
|
| Trichome-related Gene from Literature |
N/A
|