| Acc. |
TCMT56995 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
tRNA pseudouridine synthase A OS=Pelodictyon phaeoclathratiforme (strain DSM 5477 / BU-1) E-value=4e-14; tRNA pseudouridine synthase A OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / ATCC 23582 / Paris) E-value=9e-14; tRNA pseudouridine synthase A OS=Leptospira biflexa serovar Patoc (strain Patoc 1 / Ames) E-value=9e-14; tRNA pseudouridine synthase A OS=Brachyspira hyodysenteriae (strain ATCC 49526 / WA1) E-value=5e-12; tRNA pseudouridine synthase A 1 OS=Clostridium perfringens (strain 13 / Type A) E-value=5e-12; |
| Length |
1810 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_JCVI-MT2 (2 ESTs); MT_DSTEM2 (1 ESTs); MT_ECELL (1 ESTs); MT_FLOSEED_MTY (1 ESTs); MT_INSECT (1 ESTs); |
| Sequence |
CGTAGGGTATGCATTCTTCTAACACGAAGCACATGTTGATGGGTTCCTTATTGTTCAGAC
ACAACAACATTTCCCTTTATCCTTCATCACGGTCACGGCGTTGTAATTATTGGATGGAAC
ACCAAAGTGAAAGAGATAGTCATCATGTTCATTACAACCACACCCATCCCTCCAAATACG
CTAGATGGAACGCTAGGGAGAGCTTCGAATTCATGTATGCAAGGCCTTGGCAACGAGTCA
ACCATTTCTACTCCAACACTGTCCGTGGCAACTTCTCTTTGCCCCTTCTTTTTCAATCTC
AGACCCTTCCGGTTCATGATTCTCGAGTTCCAGAAATTTCTGAGTTTCAAAGTGGTGCAT
CCAAAGATCGTAGTGGGAAGTGGGCAAGATTCAATTTCAAAATTCTTCTTTCCTATCACG
GTGGTTCTTTTGATGGCTGGCAAAAGCAGCCAAACTTGAACACTGTTCAAAGCGTTGTAG
AAGTGTCACTTGGTAAATTTGTTGATGAAAACAAAACTCAGCTACTCAAGGACAAAGGTT
TGCCTATCCAAGGTTGTGCTGCTGTTGCTGGTCGAACAGACAAAGGAGTAACAGCCCTTC
AACAAGTTTGTTCTTTTTACACTTGGAAGAAGGATATTAAACCAAGAGAAATTGAAGATG
CAATAAATGACGCAGCACCAGGAAAATTAAGGGTCGTATCTGTATATGAGGTATCACGTG
CCTTTCATCCAAACTTCTCTGCCAAATGGAGGCGTTACCTTTATATTTTCCCACTCACCG
ATGGACAGGATAAAGACCAAAGCGGCGGCAATGGAGAGTCTTGTGACAGTTTTATATATA
ATGAAATTTGTGATTCTGACAGCAAGGATGAGTTAGAAAAAGAAAATAAATCATATGTGT
TCGGTGTAAGGAAGGTGAACCGGCTTTTGCAAAAATTGGAAGGAAAAATGCTGTCCTACA
AGATGTTTGCCCGTGATACAAAAGCTTCAAGAAATGATGGTCCACCAACAGAGTGTTTTG
TTCACCATGCTCGAGCTATGGAAGCGAAGTTGCCTATAACTGAAAATGGAGAAGAAACGA
GGGTTATGTGCATTGAGTTAGTTGCTAATCGCTTTTTACGCAAGATGGTTAGAGTGCTTG
TGGCAACCACAATTAGGGAAGCTGCAGCCGGTGCTGAAGATGATGCCTTGTTAAAGCTTA
TGGATGCTACGTGTAGGCGTGCCACTGCTCCTCCAGCACCCCCTGATGGCCTATGTCTAG
TTGATGTTGGTTATGCAGAATTTGAACGTGAAAAATGTTTCATCATGAAAGATTAGAGCT
TTGGTAAGTTGTAGAAAAGTGAATTTCGAAGAAGAGATCATTTTTGTAAATGACTCTAAA
GGGTCAATATTAAAAGCGAAAAATATTGAGTGAGCCAAGTGAAAGTGGATGCATGCACGA
AGGATTTAAATGAAAGCCATCACATATGTGAAAAACTAAAATTGTGCTTATAAAGGAGGG
GAAAACTAAAACCACATTGCTCTTAAACTCACCGTGGTGCAGGGGAGAAAGTGGAAGGGG
AGCAATTTGTATTCCCTCTAATCGTGGAGGCACTGATCTAAACTATTGGATAACACATAT
TCTTGTATTTTGGACTCGGTTCACTCAAAATTGGGAGTAACATCATTGTAGAGCTTTTGG
TCAACATTGAACAATTTAGATTGTGTCTGCGAAATTCACAATTCATTTGTTGGAGGAATT
TCAGATCTGAATTCTCTCTTTGAATTTGTGTATTGACTTAACTTTTTCTCATTCTCCATT
TATTTATCCG
|
| EST members of Unigene |
AW692816 BG447753 DW017548 BI268294 GE349777 GE344730
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
4.2.1.70 5.4.99.12 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.19804.1.S1_at, Mtr.45505.1.S1_at
|
| Corresponding NCBI Gene |
833501
|
| Trichome-related Gene from Literature |
N/A
|