| Acc. |
TCMT57070 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase UPL6 OS=Arabidopsis thaliana E-value=2e-89; Ubiquitin-protein ligase E3B OS=Homo sapiens E-value=1e-12; Ubiquitin-protein ligase E3B OS=Mus musculus E-value=2e-12; Ubiquitin-protein ligase E3B OS=Xenopus tropicalis E-value=1e-11; Ubiquitin-protein ligase E3C OS=Homo sapiens E-value=2e-09; |
| Length |
680 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_SEEDROOT_KV3 (2 ESTs); MT_SROOT_KV2 (1 ESTs); |
| Sequence |
AAAATGGCCATCTTTGTCTGAGCGGTTATCATACCTCTCAGGGGATGCCCCTGGTTGGCT
GTTACCACTTGCTGTATTCTGTCCTGTCTACAAGCATATGCTTATGATAGTTGATAATGA
GGAATTTTATGAGCAGGAAAAACCCCTATCACTGAAGGATATGAGCAGCCTCATCATTTT
GTTGAAGCAGGCTCTTTGGCAGCTACTTTGGGTAAATCATACCTCATCTGCTAATTCAGT
TAGATCTATTCCAGTTAGGACAAGCAGTAAAAAGCTGTCTATTGAATCCATTCAACAGAG
GGTTAGCATAGTCGTCTCTGAACTCCTGTCCCAGCTACAAGATTGGAACAACAGACGGCA
GTTTACATCCCCCAGTGATTTCCATGCTGACGGGGTGAATGACTTTTTCATATCTCAGGC
TGTTATAGAAAATGCACGAGCAAATGAAATTTTGAAGCAGGCCGCTTTCCTGATACCATT
TACAAGCAGGGTTAAAATATTCACTTCTCAACTAGCTGCAGCTAGGCAAAGGAATGGATC
TCATGCTGTATTTACTAGAAATCGGTTCAGAATAAGGCGTGACCATATTTTGGAAGATGC
TTATAATTCAATGAGTCAGTTGTCAGAAGATGATCTTCGAGGACTGATTCGTGTGACTTT
TGTCAATGAATTTGGAGTTG
|
| EST members of Unigene |
AW736712 AW736705 AW257542
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10588 ubiquitin-protein ligase E3 B |
| EC |
6.3.2.- 6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.11298.1.S1_at, Mtr.30448.1.S1_at
|
| Corresponding NCBI Gene |
820979
|
| Trichome-related Gene from Literature |
820979
|