| Acc. |
TCMT60169 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana E-value=0; Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana E-value=0; |
| Length |
1133 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_CDS (1 ESTs); MT_Shoots (1 ESTs); MT_GESD (1 ESTs); MT_SEEDROOT_KV3 (1 ESTs); MT_LEAF_PHOMA (1 ESTs); |
| Sequence |
CACTGTTTCTATTCCGCATTTTCCCTAGAAAACTCTCTCTCTCTCTCTCTCTCTGCATGT
CTTTAATTTGAATATTTCTCGTTCAACTTCCAAACACGCACTCTTCATTTTCTTTGTTGA
AAACTCAAAACCCACCAAAACCCTTTTCTCATCTTCTATCAAATGTTCTTCTGATCAATT
TTATCGCTTCAGGGCCGCTGGGGATTTCTCTTGCTAGCATGGCATTGAGTAATCCACTCT
TTGATGATATACGAAGCAACATTGATGTTGATCCTCCTCAAAAGGAAGAGTCAACAGATG
TTGGTATATTGGTGAATGATCCTGCACAAACTGCTCTTAAACCTACTGGGACTGTTTTAA
GCAGTGTTCGTGAGCTTCTAGAGTGTCCTGTATGCCTGAATGCTATGTACCCTCCAATCC
ATCAGTGTTCGAATGGTCACACTATATGCTCAGATTGCAAACCTAGAGTACATAACCGGT
GCCCTACTTGTAGGCATGAGCTGGGAAATATTAGATGTCTAGCACTGGAGAAGGTGGCTG
CATCTTTTGCACTCCCCTGTAAATTCAAAGATTTTGGGTGCATCGGTATATATCCATACT
ACAACAAGCCAGAACATGAATCTCAATGTTCATATAGACCCTATAACTGTCCATATGCTG
GTTCAGAATGCTCTGTTGTGGGTGATATAAACTACTTGGTGACCCATCTGAAAGAAGATC
ACAAAGTGGACATGCACAATGGTAGCACTTTTAACCATCGTTATGTCAAATCAAATCCTC
AAGATGTTGAAAATGCAACATGGATGTTAACGGTTTTCAGCTGTTTTGGTAAGTACTTTT
GTCTACATTTTGAAACTTTTCAACTTGGAATGGCTCCTGTCTACATAGCCTTTTTGCGGT
TCATGGGTGAAGATAGTGAAGCAAAAAATTATAGCTACAGTCTAGAGGTAGGCGGAAATG
GGAGGAAGATGGTTTGGCAAGGAGTGCCAAGAAGCATCAGGGAAAGTCATAGCAAGATCC
GCGACAGTTTTGATGGTCTTATTATTCAGAGGAATATGGCGCTTTTCTTTTCAGGTGGTG
ACCGGAAAGAGTTGAAGCTAAGGGTTACTGGTAGGATTTGGAAAGAACAATGA
|
| EST members of Unigene |
EU189950 CX525695 CA991140 AW736137 BQ140396
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K04506 E3 ubiquitin-protein ligase SIAH1;
Environmental Information Processing > Signal Transduction > ko04310 Wnt signaling pathway > K04506 E3 ubiquitin-protein ligase SIAH1 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.20344.1.S1_at, Mtr.41563.1.S1_at, Mtr.41563.1.S1_s_at
|
| Corresponding NCBI Gene |
825352
|
| Trichome-related Gene from Literature |
N/A
|