| Acc. |
TCMT60585 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Probable E3 ubiquitin-protein ligase HERC4 OS=Mus musculus E-value=5e-27; Probable E3 ubiquitin-protein ligase HERC4 OS=Rattus norvegicus E-value=1e-26; Probable E3 ubiquitin-protein ligase HERC4 OS=Homo sapiens E-value=6e-26; Probable E3 ubiquitin-protein ligase HERC3 OS=Homo sapiens E-value=2e-23; Probable E3 ubiquitin-protein ligase HERC1 OS=Homo sapiens E-value=2e-23; |
| Length |
2183 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_CDS (1 ESTs); MT_DSTEM2 (1 ESTs); MT_JCVI-MT1 (1 ESTs); MT_NOD_ROOT (1 ESTs); |
| Sequence |
CTACTACTAGACTAGTGGCAAATATTGTCTGTTTGTGGTTGTGTGTTCTCGCGGGAGGCA
ATGGAAGACGCCGGAAGTTATCCAAATCCCGACAACCCATCGCACAAAATCGTTGACGTC
GCTGCTGGTGAATCACACACTCTTCTTCTTACTGGTAACTCTATTCAATTTTTTCTCAAT
CTGAATACACAAAAAACGTGGAAATTGAATCCTCACACTGCTTATTTGCAAAGTAAATAT
CTCTGTTATGAATCATATGATTGTTTGAGGGTTTAATTTTGTGTAGAAGATGGCAGTGTA
TACTGTTGGGGTAGAGGAATGTTTGGACGGCTTGGTAATGGTTCTCAAAAAGATGAACTT
TTCCCAAAAAAACTCAACTTTGGAAACCCTAATGGAACTCAAGACAGTGTTAAAATAGTG
GGTATTGCTGCTGGTTCTTATCACACTCTTGCTCTTGCAGAAGATGGATCTGTTTGGTGC
TGGGGTTACAATATATATGGTCAACTTGGTCTTTGTGAAGAGGAGGACTCGCATGGTTCC
TTAGTTCCTTGCTTACTTAGCAGGTTTCTTGAGTTGCAACCGCACAATTCTTCAACAGAC
CCATCTGAAGCAGAAGACAAAGCATCACTAGAGATGTGTACTGTCAAAGCAGGAGGAATG
ATGTCTCTGGCTATTGATAATCGCGGAACCCTATGGATGTGGGGAAACATCCCACAAGAA
AGCAAAGAAAGTGGGATATCTCTTGTAAGCAGTTTCACTCCAACGCCAGTCTGGGATTTT
CACGGTCGAACTGTTGTCAAGGTTGCATGTGGAAACGAGCATGTCGTAGCTCTGGTTAAT
GCTATAGACTCACACGAGGATGAAGATCTACTATGCTACTCTTGGGGTTATAACAGCCAT
GGCCAATTAGGTTTGGGGGATAGGCAGAGCAGGCTGCATCCAGAAGTTGTAAAAATACTC
GACGAGGAGTCTCCTTGGACAATTTATGAGGTAGCATGTGGTGCCTTTCACACTGCTTTG
CTTGCTCACAAAAAGAAACCTGACGCCACATTAGAAAGCATGTGCTGGACCTTTGGCCTT
GGTGAGAATGGCCAACTTGGACACGGAACAACGCAAAGCACTTTATTTCCTACTCCTGTT
AAAGAATTGCCACAAAGCATACACCTTATTTCTGTTGACTGTGGCTTGTTTCATACAAGT
GTTGTGTCCTCAACTGGGGATGTGTGGTCATGGGGAATGGAGAAGGGTCTTGGCTTATGT
CCTGATGCTAATCGTGCTGAAACAAATTCTGGTGGTGACGCCCTCTCTCCTCTTCTCATC
TCATGCGAATTTACATCAACCCATTTTTCCAGGTCCCGTTAAAGTTGCATGTGGGGCAGC
ACATACTGTTGTTGTTGCTCAGGAGGGACATAAGGTTTGGTCTTGGGGTAGGGGGAGGAG
TGGAGTTCTTGGGAATGGAAAAGAAATGGATAGTTACACTCCCACCATTGTTCCGCGGCC
TCCAACAATTGAGGGCCTCGAAGAAGAGGAATTAAATAGCTCTGATGGGCAAGATAAGGT
CGCAGAAAAAAAACCCGAAATAATAGCAGAAACAGATGAGAAATTATCCACGGCGTTGAA
TGAGCTGAAGCTGCTTCAAACAAAGCTATCTATAATGGAGAAATATGCTAGTATACTTCA
TGGTTCAATTTTTGGAAAACCATTTAATGAGCAAGATATCCCTGTTTCATTGGGGAATTC
TGGTTCAATGGATATTGCAAAAGAATGGGAGAACATGTTAGAGGCAGCAGATGATAGGAA
GCTAGTTACGATGGAAATGTTTTACCGTGACATGCTTACCGGTGTGAAAGATAAATTAAT
GAAGAGAAAGATCAAAGAAATTATAAAGGAGTGTCTCGAATCTTCAGAGGTAATTAAATA
ATTAGTATGATAGAAACAAAACACATGTTATGAACACAAGATTTCACATTCAAAGCAGTG
AAGTTATTTGATCTTTCCATTTTGTGTAAATGGTCTGCTCATTTGTCCCTTAACTTGATC
AATCTTTCTGAGCACTATGTATTACACTATTATGACTTTGGATTATGAGATATTATTTTG
CTTCATTCATTACTGTCATTTTCAAAAATAAAAAAGGGTAAGTGACTATTTTTAAGTTAT
CAGAAAAAAAAAAAAAAAAAAAA
|
| EST members of Unigene |
BT053046 AW688612 EV259358 AW685881
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10614 E3 ubiquitin-protein ligase HERC3;
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10615 E3 ubiquitin-protein ligase HERC4 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.39640.1.S1_at
|
| Corresponding NCBI Gene |
831030
|
| Trichome-related Gene from Literature |
N/A
|