| Acc. |
TCNT61572 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana E-value=4e-42; E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana E-value=4e-41; E3 ubiquitin-protein ligase ptr1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=2e-27; E3 ubiquitin-protein ligase HUWE1 (Fragment) OS=Rattus norvegicus E-value=6e-26; E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus E-value=6e-26; |
| Length |
890 nt |
| Species |
Nicotiana tabacum |
| Belonged EST Libraries |
NT_AGN_RNC (2 ESTs); NT_AGN_PNL (2 ESTs); LIBEST_023330 (1 ESTs); NT_CHO_SL (1 ESTs); NT_COL (1 ESTs); |
| Sequence |
GAATGGCGACCAAGTTCTCCATTTTCAAAAAAAATTATCAGATCAAGTATAGCATTATAA
GCTGATTAAAGTGTTGATCTGATGCCAACCGGTAACCATAGGTAATTAATCAAATTCTAA
AGCATGAATGAATTAGCACCTACCCCAGACCCAAAATAAATGTAGACCTCCCACACCGAG
TCCCCTTCCAAACAGAAAATGGAAAATGAAATATGTTACTTATCTACACAGGGACCGAAC
TTTGTTGGAGTGACTTCTGAATCTGTTGGAATGGAAGGAACAACAAAATCGGAGCTCCTC
GCCACTGTGCAAGAAGATTACCACTCGTAATGCATAACCCCCTACCTGAAGATACTAAAC
TGCCATGTACATGACCGAAGCATAGCAATTACCCAGTCATCCTTCCATCATCCTTAAGAT
AGGCTGTATATAGACTCAAATCTGTAAGCAACACACTCCCAATCTACGTTGTCCAGTTGA
TATCGATCAGCCGGTATTTACATGGAAATCACAGGATGATCAAATATAAGCAATTTTCGG
GGAAGCTGCAAAAGGGAAGCTTGTCTCAACCAAAACCAAATCCTTCACTAGCCTCATGGA
TAGCCAAAAGCAAACGTTCTTGAAGCTGTTCCTTGGAAGTATACTCCGGTAGGTCAAGTT
GGTTGAAGCAGGTATGTGCAGATGGAAGCCGCTCAGGAGCTCCATAAGCCTTGTGAATCT
GAAATCTCTGAGGGCCAGAAATCCCTTGCAATGCCTTGAAACCTTCCAAAGGAACCTTGG
ATGTACCAGTCACAAATTGCAGAAATCTTGCCATGTCTTCCTTGCTAAACCTTTACGTAC
CTCCCAAACCACTGACACAGTAGATGCTGCTGTATATCAGTATATTCAGA
|
| EST members of Unigene |
FG181129 FG626528 EH622917 FG153587 AM837596 FG167497 FG195020
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10592 E3 ubiquitin-protein ligase HUWE1 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
8.A.3 Cytoplasmic membrane-periplasmic auxiliary-1 protein MPA1 plus a cytoplasmic domain MPA1-C or MPA1+C |
| Probeset |
|
| Corresponding NCBI Gene |
842036
|
| Trichome-related Gene from Literature |
842036
|