Detail of EST/Unigene TCSH51283
Acc. TCSH51283
Internal Acc.
Type TC/Unigene
Annotation (Top 5 hits in Uniprot_trembl) Pathogenesis-related leaf protein 4 OS=Solanum lycopersicum E-value=9e-78; Pathogenesis-related leaf protein 6 OS=Solanum lycopersicum E-value=1e-76; Pathogenesis-related protein PR-1 type OS=Sambucus nigra E-value=1e-51; Basic form of pathogenesis-related protein 1 OS=Nicotiana tabacum E-value=3e-49; Pathogenesis-related protein 1A OS=Nicotiana tabacum E-value=3e-48;
Length 1017 nt
Species Solanum habrochaites
Belonged EST Libraries SRR027940 (129 ESTs); LIBEST_025268 (95 ESTs); LH__Ea (62 ESTs); SRR027941 (5 ESTs);
Sequence AAATTTTATGTATATTAATGTTTTATGGAACAAGAAGATGCAGTACTTAATAATCAACTT
AAGCCCATTATGAACATATGGTATGTGGAATTATTCATATTAGCAACATCAAAAGGGAAA
TAATAATAATTATAGATGTTCAATATTTAATCCCTTAATATTTTAGATAGGAGATTGACT
TGATCCATATGTCAAACTTAAAGTTTAACTTCTCGACGTCTCATCTGAGAATTTTATTTA
ATACTAGCAACATGTCATAAGTAAACATCCTTTTAGTAAGGACGTTGTCCGACCCAATTG
CCTACAGGATCATAGTTGCAACAAATGAACCACCATCCGTTGTTGCAACGAGCCCGACCA
CAACCAAGCCTGACAGAATTACGCCAAACTACTTGAGTATAGTGTCCGCACACTTTCCCA
CTAGCACATTGGTTGGTACCATAGTTGTAGTTTGGCTTCTCCGCCACCCACAATTCAGAG
GCACGCCTCCCCGTGAAGTCTCCACTACCCTTGGCAAGATTCTCTCCTGGACCAGAATGA
ATCAAGTTGCAATCACCTCTTCTTGAGTCAGCATACCTTTGTGCTTTGGTTGCCAAGGCG
TTATCCCAAGACATAGGCCCAACCCCGACTTGACCACGAGCATTGTTGTGAACCACAAGA
TAGTCTTGTGGTGAATTTTGAGCGTCACAAGAGTGAAATATGGCTAATATCATGAAACAA
AAGAGAAACAATGTGTTTTTGAATAACCCCATTGAATTTTAGGTGTAGTTGAGCCTCGTG
CCGAATTCGGCACGAGGATATTAAGAAATTTGTGTCATAGGCTGGGTGTATTATGTCACT
AGTGCTTCAAAATAGTTATCGGGGTATTAGATAAAGGAAAAGCTGTCCTGTTCTTATAAG
ATCTGTTGTCGTCTATATATTTATTCCTATGTATGGAAACATGTTGTATCATTTTGATCG
ACCTGTTGATGGGCTATAAATTTTCCTATTTATTCATTTATGTGATTGTTCATTCTT
EST members of Unigene SRR027940.101003  SRR027940.65966  DN167959  SRR027940.90110  DN167958  SRR027940.30534  SRR027940.119690  GT178527  SRR027940.73751  GT177802  GT178555  DN167589  SRR027940.35182  SRR027940.105658  GT168708  SRR027940.35186  SRR027941.271846  GT174513  DN168344  GT172687  SRR027940.104150  GT173290  GT172665  DN172605  SRR027941.305431  SRR027940.85848  SRR027940.112704  SRR027940.39503  DN168719  SRR027940.44563  DN168720  SRR027940.19646  GT173303  GT172681  SRR027940.120085  SRR027940.83108  GT174493  SRR027940.124386  GT173342  SRR027940.130165  SRR027940.20358  DN168013  DN168793  DN168794  SRR027940.40982  SRR027940.100558  SRR027940.40979  DN167244  SRR027940.33577  SRR027940.36303  SRR027940.16838  SRR027940.7877  GT173847  GT179457  DN169199  DN169200  GT179460  SRR027940.30479  DN168011  SRR027940.23501  DN171878  DN171879  GT179411  DN168767  SRR027940.75282  GT179412  SRR027940.120820  GT174534  GT171334  GT176771  DN169162  DN169163  GT172905  SRR027940.124706  SRR027940.80719  GT172741  SRR027940.6311  SRR027940.50803  SRR027940.124099  SRR027941.38460  DN170955  SRR027940.91782  DN170956  SRR027940.84382  SRR027940.127190  SRR027940.68804  SRR027940.103450  SRR027940.27911  GT169565  DN168635  GT169567  DN172531  DN172532  SRR027941.302256  GT169578  GT181924  GT168939  GT182697  DN169775  SRR027940.46231  DN169776  SRR027940.90626  GT172847  GT171514  DN169777  DN169778  GT176070  DN171726  SRR027940.129148  DN171727  SRR027940.83223  SRR027940.72318  GT181339  GT175671  GT176894  SRR027940.16209  DN170603  DN170604  SRR027940.28639  GT172641  SRR027940.18123  SRR027940.8777  SRR027940.32524  DN172193  DN172194  SRR027941.79070  DN169084  GT178488  DN169085  GT171255  SRR027940.129842  SRR027940.67564  GT169633  SRR027940.58595  GT169230  GT168722  SRR027940.71086  SRR027940.59806  SRR027940.90574  SRR027940.45398  SRR027941.173566  SRR027940.113143  SRR027940.101077  SRR027941.294472  SRR027941.53402  SRR027940.124035  SRR027940.36434  DN171398  DN171399  SRR027940.18135  GT183444  SRR027940.76931  GT173254  SRR027940.40319  SRR027940.77680  SRR027940.55370  SRR027941.151585  SRR027940.57593  SRR027941.289685  SRR027940.121831  SRR027940.54867  GT176815  DN170874  GT183305  SRR027940.46299  GT171205  SRR027941.178963  SRR027940.108206  SRR027940.36170  SRR027940.122988  SRR027940.94579  SRR027940.61864  SRR027940.6181  SRR027940.102745  SRR027940.117942  SRR027940.56036  GT179725  DN171629  SRR027940.88384  SRR027940.64238  GT176631  SRR027940.53327  GT174561  SRR027940.35417  SRR027940.103556  GT169176  SRR027940.60719  SRR027940.42808  GT179917  GT176647  GT178606  GT170242  SRR027940.81355  SRR027940.48619  SRR027940.70043  GT172793  GT175624  SRR027940.120624  SRR027940.92600  GT179969  GT184079  GT178827  GT182663  SRR027940.66120  GT169513  GT183354  GT174799  SRR027940.95704  SRR027940.110489  DN169375  DN169376  SRR027940.129552  SRR027940.25607  SRR027941.44601  DN172076  SRR027940.99631  GT172794  SRR027940.44335  SRR027940.107412  GT169486  DN167393  DN167394  GT179774  SRR027940.23312  GT171467  SRR027940.12796  GT172623  SRR027940.55615  GT182647  GT173719  GT176026  DN172075  DN168993  SRR027940.40485  SRR027940.128947  GT182114  DN168061  DN168062  SRR027940.53006  GT183215  GT175905  SRR027940.42881  GT176396  GT180691  DN169235  GT173886  SRR027940.80263  SRR027940.30030  SRR027941.61378  SRR027941.91134  SRR027940.31581  GT177023  DN168835  SRR027940.128150  SRR027940.132058  SRR027940.31231  SRR027940.95481  GT172952  GT179465  GT174916  SRR027941.266030  GT176982  SRR027940.83798  SRR027940.89249  SRR027940.25391  GT177215  GT178787  SRR027940.104421  GT182103  SRR027940.65879  SRR027940.34328  SRR027940.38194  DN170028  SRR027940.119523  GT180730  DN172386  DN167327  GT182163  GT183263  DN172391  DN170056  DN168889  DN172392  DN167333  GT175954  SRR027940.8184  SRR027940.35047  SRR027940.64252  SRR027940.84889  GT169435  SRR027940.31925  DN167326  GT176605  SRR027940.19497  SRR027940.123445  SRR027940.103599  SRR027940.120723  GT177259  GT173903  SRR027940.98937  DN170029  GT174972  SRR027940.28449  GT176434  GT170195  DN168100  DN171991  DN168099  DN171990  SRR027940.89581  SRR027940.71280 
InterProScan Domain  
Gene Ontology  
KEGG Orthology
EC
Transcription Factor Family
Transporter Classification Family
Probeset
Corresponding NCBI Gene 815949 
Trichome-related Gene from Literature 815949