| Acc. |
TCSL73912 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
3-hydroxy-3-methylglutaryl-coenzyme A reductase 1 OS=Solanum tuberosum E-value=0; 3-hydroxy-3-methylglutaryl-coenzyme A reductase OS=Nicotiana sylvestris E-value=0; 3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 OS=Capsicum annuum E-value=0; 3-hydroxy-3-methylglutaryl-coenzyme A reductase 2 OS=Solanum lycopersicum E-value=0; 3-hydroxy-3-methylglutaryl-coenzyme A reductase 3 OS=Solanum tuberosum E-value=0; |
| Length |
2013 nt |
| Species |
Solanum lycopersicum |
| Belonged EST Libraries |
SRR015436 (4 ESTs); SL_flower_buds3 (4 ESTs); SRR015435 (4 ESTs); SL_CDS (3 ESTs); SL_maturing_fruit (2 ESTs); SL_FLOWERBUDS (2 ESTs); SL_flower_anthesis (1 ESTs); SL_flowerbuds4 (1 ESTs); SL_TAMU_CALLUS (1 ESTs); SL_PRERIP_FRUIT_TAMU (1 ESTs); SL_MicroLEAF3 (1 ESTs); SL_SHOOT_4WEEK (1 ESTs); SL_Lyc_leaf (1 ESTs); |
| Sequence |
TGTCCCCAAATTGTAGCGCGCCAACCGCTTTTCACTCTATAAATACATTTCTTCTACTTT
CGCTTCTCCACACAAACCATCACTGCTTAATACACATTTGACTTTCTCTCTCTCTCATTT
CTCTTTTTTTTTTTCTTTTCAAAAAGCCGGTGTTCCTGCCGGAAAATCAACTAAATTTAC
AATGGACGTTCGCCGGCGACCAGTTAAGCCTTTATGCACATCAAAAGATGCTTCCGCCGG
CGAACCTCTGAAACAACAACAAGTTTCTTCTCCTAAAGCATCTGACGCGCTTCCACTCCC
ATTGTACCTAACCAATGGGTTGTTTTTCACCATGTTTTTCTCTGTTATGTATTTTCTTCT
CGTAAGGTGGCGTGAGAAGATCCGTAATTCTATTCCTCTTCATGTGGTTACCCTTTCTGA
ATTGTTAGCTATGGTGTCATTGATTGCTTCCGTTATATATCTATTGGGTTTCTTTGGGAT
TGGGTTTGTTCAGTCGTTTGTGTCCAGGTCGAATAGTGATTCATGGGATATTGAGGATGA
GAATGCTGAGCAGCTAATTATCGAGGAAGATAGCCGCCGGGGACCATGTGCTGCTGCAAC
TACTCTTGGCTGCGTTGTGCCTCCACCACCTGTTCGAAAAATTGCCCCAATGGTTCCACA
GCAACCTGCCAAGGCAGCTTTGTCCCAAACGGAGAAGCCTGCGCCAATAATTATGCCAGC
ATTATCGGAAGATGACGAGGAGATAATACAATCTGTTGTTCAGGGTAAAACACCATCATA
TTCTTTGGAATCAAAGCTTGGTGATTGTATGAGAGCTGCTTCGATTCGAAAAGAGGCGTT
ACAGAGGATCACAGGGAAGTCATTGGAAGGGCTCCCATTGGAAGGATTTGACTATGAGTC
TATTCTTGGACAATGCTGTGAGATGCCTGTAGGATATGTGCAAATACCGGTTGGTATTGC
AGGGCCTTTGTTGCTTGATGGGAGAGAGTACTCAGTGCCAATGGCAACTACAGAAGGGTG
TTTAGTTGCTAGCACCAACAGGGGTTGCAAGGCTATCTTTGTCTCTGGTGGCGCCAACAG
CATTTTGCTCAGAGATGGCATGACAAGAGCTCCGGTTGTCCGGTTCACCACCGCCAAAAG
AGCCGCAGAGTTGAAATTCTTCGTTGAGGATCCCCTTAACTTTGAGATTCTTTCTCTTAT
GTTCAACAAATCAAGCAGATTTGCTCGATTACAGGGCATTCAATGTGCTATAGCTGGTAA
AAATCTGTATATGAGATTCAGTTGTAGCACTGGTGATGCAATGGGAATGAACATGGTATC
CAAAGGTGTCCAGAACGTTCTGGATTACCTTCAGAGTGAATATCCAGACATGGACGTCAT
TGGCATATCTGGGAACTTTTGTTCGGATAAGAAGCCAGCAGCAGTTAACTGGATTGAAGG
TAGAGGAAAATCAGTAGTTTGCGAGGCAATAATCAAGGAGGATGTAGTGAAGAAAGTGTT
GAAAACTGAGGTTGCTGCTCTTGTGGAGCTGAACATGCTTAAAAACCTTACTGGGTCAGC
CATGGCTGGTGCCCTCGGTGGCTTCAATGCTCATGCCAGCAACATCGTCTCTGCTGTATA
TTTGGCCACTGGCCAAGACCCTGCTCAAAATGTTGAGAGCTCTCACTGCATTACTATGAT
GGAGGCTGTAAATGATGGCAAAGACCTCCATATTTCAGTAACTATGCCTTCTATTGAGGT
TGGTACCGTAGGTGGTGGAACTCAACTTGCATCACAGTCAGCTTGCTTGAACTTACTAGG
AGTTAAAGGTGCAAATAGAGATGCACCAGGTTCAAATGCAAGACTGTTGGCCACAATAGT
AGCTGGTTCTGTTCTAGCTGGTGAGCTATCTCTCATGTCAGCTATCTCTGCTGGCCAACT
AGTTAAAAGTCACATGAAATATAATAGATCTATCAAAGATATTTCCCAAGTAATCAATTC
CTCTTGAGGATTAATAGCCCCCCCCCCCCCCCC
|
| EST members of Unigene |
AW738037 BI926318 BI924400 AF420477 BG123694 SRR015436.161091 SRR015436.160691 SRR015436.243346 BI924558 SRR015436.39126 AW031959 AW934549 BE354178 SRR015435.82620 DB699448 LEU68071 AW932956 SRR015435.103078 BI924280 TOMHMGR SRR015435.354333 BP894230 BP878958 BI935372 SRR015435.32341 BP900757
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Metabolism > Lipid Metabolism > ko00100 Biosynthesis of steroids > K00021 3-hydroxy-3-methylglutaryl-CoA reductase |
| EC |
1.1.1.34 |
| Transcription Factor Family |
|
| Transporter Classification Family |
2.A.6 Resistance-nodulation-cell division factor superfamily RND |
| Probeset |
|
| Corresponding NCBI Gene |
843982
|
| Trichome-related Gene from Literature |
843982
|