| Acc. |
TCSL74581 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase TOM1-like OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) E-value=0; E3 ubiquitin-protein ligase ptr1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=0; Probable E3 ubiquitin-protein ligase TOM1 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) E-value=0; |
| Length |
1596 nt |
| Species |
Solanum lycopersicum |
| Belonged EST Libraries |
SRR015435 (4 ESTs); SRR015436 (4 ESTs); SL_GFRUIT (2 ESTs); LIBEST_025266 (2 ESTs); SL_MicroLEAF3 (1 ESTs); SL_FLOWER_DEV (1 ESTs); SL_FRUIT (1 ESTs); LIBEST_024426 (1 ESTs); SL_TAMU (1 ESTs); SL_flower_buds4 (1 ESTs); SL_SEED (1 ESTs); SL_Lyc_leaf (1 ESTs); SL_breaker_fruit (1 ESTs); SL_cTOS (1 ESTs); SL_ROOT_pre-anthesis2 (1 ESTs); SL_TAMU_CALLUS (1 ESTs); |
| Sequence |
GTGATGTGTGAGAAGTTGCATCCTGAGCATTTGGGTGCAGGACAGGAGTTCAGTATTGCG
ACAGTTCCTGATCCAGAAGAAGCTACTGCTTCTGCTATGCAGCCAAAAACACCTACATCT
GCAACAAAAGTTGATGAGAAGCACATTGCTTTTGTAAAATTTGCAGAGAAGCACAAAAAA
CTTCTTAATGCTTTTGTTCGGCAGAATCCTGGACTACTGGAGAAGTCTTTCTCGATCATG
CTGAAGGTTCCTCGTTTTGTTGATTTTGACAATAAAAGGTCCTACTTCAGATCTAAGATT
AAACATCAACATGATCATCATCACAGTCCTCTGAGAATTTCTGTGAGAAGAGCTTATATA
CTTGAAGATTCATATAATCAGCTGCGCATGAGGACAACTCAAGAATTGAAAGGGAGATTG
ACTGTACATTTCCAAGGGGAAGAAGGAATTGATGCTGGTGGACTTACTAGGGAATGGTAT
CAGTTATTGTCCAGAGTAATTTTTGACAAGGGAGCGCTATTGTTTACTACAGTTGGCAAT
GAAGCAACATTTCAGCCAAATCCCAACTCTGTGTACCAAACTGAGCACCTCTCATACTTC
AAATTTGTTGGGCGAGTTGTTGGGAAGGCACTATTTGACGGCCAACTTCTTGATGTTCAT
TTTACACGGTCCTTCTACAAGCACATACTTGATGCTAAAGTGACATATCATGATATCGAA
GCTATTGATCCTGACTACTTCAAAAATTTGAAATGGCTGCTTGAGAATGACATCAGTGAT
ATTTTAGACCTTACATTCAGTATTGATGCTGATGAAGAGAAGTTGATACTTTATGAACGC
AATGAGGTGACTGATTATGAACTAATCCCAGGTGGACGAAATATCAGAGTCACGGAGGAA
AATAAGCAACAGTATGTCAACTTGGTTGCTGAGCATCGGTTGACGACTGCTATCCGTCCT
CAGATAAATGCATTTTTGGAAGGATTCAGTGAATTGATTCCGCGAGAGCTGATCTCTATT
TTTCATGACAAGGAACTTGAGTTGTTAATTAGCGGTCTTCCAGACATCGATCTTGATGAC
TTAAGGGCAAATACAGAATATTCTGGATACAGCCCAGGTTCACCTGTTATTCAGTGGTTT
TGGGAAGTTGTTCAAGCTTTTAGCAAGGAAGACAAAGCTCGCCTTCTTCAATTTGTCACT
GGAACCTCAAAGGTGCCATTGGAAGGGTTTAGTGCACTGCAAGGAATTTCAGGTTCCCAG
AAATTTCAGATCCACAAAGCTTATGGCAGTGCTGATCACCTGCCTTCAGCACATACATGT
TTCAACCAGTTGGATCTACCAGAGTATCCCTCCAAAGAGCATCTAGAGGAGAGACTACTG
CTTGCCATTCATGAAGCTAACGAAGGATTTGGATTTGGTTAAAACAACAATGGGTGGTCT
GAATTAGATTCTGTAGATAATTTCCATGTTAAAAAAGAGAGTTTTTTTTTTATATATACA
GGAGAACAGTCTAAGGGCATTTTAAGTCTGTGAGATACCTGTCTATAATGCTGTACAGTC
TATTTGCTATGCGAAATGATCCTGGCAGTTCTTTTT
|
| EST members of Unigene |
BG626387 SRR015435.164974 GT165256 DB704998 SRR015436.248174 AI777361 BF050428 AI898787 SRR015436.305695 BP907227 BE431721 SRR015435.40734 GT164512 FS201636 BM412147 BE449931 SRR015436.12072 BF050152 SRR015435.192992 AW030298 SRR015435.148082 BI929026 BI203535 SRR015436.244182
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10592 E3 ubiquitin-protein ligase HUWE1 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
8.A.3 Cytoplasmic membrane-periplasmic auxiliary-1 protein MPA1 plus a cytoplasmic domain MPA1-C or MPA1+C |
| Probeset |
|
| Corresponding NCBI Gene |
842036
|
| Trichome-related Gene from Literature |
842036
|