| Acc. |
TCSL80992 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase UPL1 OS=Arabidopsis thaliana E-value=7e-50; E3 ubiquitin-protein ligase UPL2 OS=Arabidopsis thaliana E-value=6e-49; E3 ubiquitin-protein ligase ptr1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=2e-34; E3 ubiquitin-protein ligase HUWE1 (Fragment) OS=Rattus norvegicus E-value=2e-31; E3 ubiquitin-protein ligase HUWE1 OS=Mus musculus E-value=2e-31; |
| Length |
697 nt |
| Species |
Solanum lycopersicum |
| Belonged EST Libraries |
SRR015436 (5 ESTs); SL_PRERIP_FRUIT_TAMU (1 ESTs); SL_SUS_LEAF (1 ESTs); SRR015435 (1 ESTs); |
| Sequence |
TGGATATACCACGGCATCTACTGCTATTCAGTGGTTTTGGGAGGTCGTTAAAGGTTTTAG
CAAGGAAGACATGGCAAGATTTCTTCAATTTGTGACCGGCACATCCAAGGTTCCTTTGGA
GGGTTTCAAAGCATTGCAAGGGATCTCTGGCCCTCAGAGATTTCAGATTCACAAAGCTTA
TGGAGCTCCTGAGAGGCTCCCATCTGCACATACCTGCTTCAACCAACTTGACCTTCCGGA
GTATACTTCCAAAGAACAACTTCAAGAACGTTTGCTTTTGGCTATCCATGAGGCTAGTGA
AGGATTTGGTTTTGGTTGAGACAAGCTTACCTTGTGCAGATTTCCTGAAAATTGCATATA
TTTGATCACCCTGTGATTGCCATGTAAATACTGGCTGATCGATATCAACTGCACAAGATA
GATTTGGAGTGGTATTTCTTAGAAATTTGAGTCCATGCAGAGGCTGATTATGTCGTTCGG
AATAAAATTGATGAGGAGCAAAATTTAATGGATGAAGAAACTAGCTACGGCAAATTGCAG
CAAGAAGATATAATACCTGAAGATGATGGTGGATACGAGTCTGAAGAAGAGCATGTGGAA
TCTAAAAATTAAGGAAAAACCAGTTGGGCCCCCATTAGAGCTGGAGATCCCATTGCGTCC
ACCACCAACTTATTCAGATAACATGAGCATGATCTAA
|
| EST members of Unigene |
SRR015436.121674 SRR015436.49713 SRR015435.200565 SRR015436.276703 SRR015436.104134 SRR015436.144305 AW930332 AI899692
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10592 E3 ubiquitin-protein ligase HUWE1 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
8.A.3 Cytoplasmic membrane-periplasmic auxiliary-1 protein MPA1 plus a cytoplasmic domain MPA1-C or MPA1+C |
| Probeset |
|
| Corresponding NCBI Gene |
842036
|
| Trichome-related Gene from Literature |
842036
|