| Acc. |
DN170872 |
| Internal Acc. |
LH__Ea07O14.r |
| Type |
Singleton/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase COP1 OS=Pisum sativum E-value=3e-74; E3 ubiquitin-protein ligase COP1 OS=Arabidopsis thaliana E-value=7e-73; E3 ubiquitin-protein ligase RFWD2 OS=Mus musculus E-value=4e-20; E3 ubiquitin-protein ligase RFWD2 OS=Homo sapiens E-value=1e-19; Protein SPA1-RELATED 4 OS=Arabidopsis thaliana E-value=4e-17; |
| Length |
731 nt |
| Species |
Solanum habrochaites |
| Belonged EST Libraries |
LH__Ea (1 ESTs); |
| Sequence |
CGGTAAAATGATCTCCAGTACATCAAAGAAGACATAAATGCTGTGGAGAAGCGTAGAATA
GAGTTACATAGGACAAGAGGTAGATATTCTGCGAAAATGAGAACGCTAGTAGATGATTCA
TCTGCAATGACAGTCAGGCCTCCATTGAGAGATAAGGGAAGTGGTGCAATTGTTTCTAGT
CCTGTTAACTTACAAGAACAAGGTCGTGCTGGCACTTCACAGACCAGGAATACTGATACA
AGAGCTCCTCGGAATTCCCAAATTGTGCAACGAAAGGATGACAACCACGGTGGATCAGAT
TCACAGGACCCTAATCAACCTGGAAAGTCATTAGCAAGGAAACGGCGCGTTCATGCGCAG
TTCAATGAGCTTCAAGACTGTTACCTACAAAAGAGGCGTTATTGGGCAAGACAGTCGCAG
AAACAGGGAGAAAGAGTAGCAAATATCAAGAGTAGAGAAGGTTATTCTGCGGGACTAGAG
GATTTTCAATCTGTTTTGTCTACCTTTACGCGATACAGTCGTCTGCGGGTTGTTGCTGAA
CTCAGGCATTCTGACATTTTTCACTCGGCCAATATTGTTTCGAGTATTGAATTTGACCGA
GATGATGAATTGTTTGCCACTGCTGGGGTGTCACGAAGAATTAAGGTCTTCGAGTTTTCA
TCAGTGGTAAACGAACCAGCTGATGCGCAATGTCCCGTTGTTGAAATGTCTACCCGATCT
AAACTAAGTTG
|
| EST members of Unigene |
DN170872
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10143 E3 ubiquitin-protein ligase RFWD2 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
|
| Corresponding NCBI Gene |
817857
|
| Trichome-related Gene from Literature |
817857
|