| Acc. |
TCMT43172 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
RNA pseudourine synthase 5 OS=Arabidopsis thaliana E-value=6e-86; RNA pseudourine synthase 5 OS=Oryza sativa subsp. japonica E-value=2e-78; Uncharacterized RNA pseudouridine synthase slr1592 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) E-value=5e-27; Uncharacterized RNA pseudouridine synthase aq_1758 OS=Aquifex aeolicus (strain VF5) E-value=3e-10; Uncharacterized RNA pseudouridine synthase slr1629 OS=Synechocystis sp. (strain PCC 6803 / Kazusa) E-value=7e-10; |
| Length |
797 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_DSIL (1 ESTs); MT_JCVI-MT3 (1 ESTs); |
| Sequence |
CGCATAATTGAACTAATGGCCACCCCAAAGAAAATCGGTATTCCTTGGCCGGAGTTCAAT
TACAGACTTTCCTATGACGACGTGGTTCGACCCTCCGATGCTGGTTTAACACTAATTGAG
TTTTACTCCACCAAGTACAAAAGTTCTGCTCCCTTGCAAGGTTGGTTGCAGCGTATAAAA
AGTGACCAGATAACACTTGATGCAAGAGTTGTTACTGATCCAAACACAATCCTCAGAGTT
GGCTCAAAGCTAGTCTATCATAGAATTCCGTGGAAGGAGCCTGATGCACCGCACACCATA
GAAGTCTTGTACGAAGATGATGACATTATTGCTCTAAATAAACCTTCTGGTCTGCAAGTT
CTGCCTGGAGGTCTCTTCCAACAAAGAACGGTTTTAACACAGCTTCAATGGGAAACCAAC
AACAAGAGTACCATTGAAGCACACCAAAAACCTCACCCTGTTCCAGTACATCCCCCAAGG
AGAGGAACTTCAGGAATTTTATTATGCGCAAAGACAAAACTAGCTAGAGCTCGTCTTGCA
TCTTATTTTGCTGATGGAACATCTCGCATAGAAGGAAAAGGACATACAAACCAAGAGCTT
GGGAAGATTGCAAAGATATACCGAGCACTTGTGAGTGGGATAATTAATAATGATCAGGTG
ACAATTAATCAACCAATTGGAATGGTAAAATATCCTGGTGTTGCTAAAGGGTTATATGTT
GCTTCTCAATCAGGGAAACCAGCACTCAGTGTAGTGCACGTTCTAGAAAGGAATGTAAAA
GAAAATAGCACATTGGT
|
| EST members of Unigene |
AW775710 EY477712
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Metabolism > Nucleotide Metabolism > ko00240 Pyrimidine metabolism > K01718 pseudouridylate synthase |
| EC |
4.2.1.70 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.27394.1.S1_at
|
| Corresponding NCBI Gene |
824391
|
| Trichome-related Gene from Literature |
N/A
|