| Acc. |
TCMT44223 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
DNA excision repair protein ERCC-8 OS=Bos taurus E-value=2e-55; DNA excision repair protein ERCC-8 OS=Homo sapiens E-value=6e-55; DNA excision repair protein ERCC-8 OS=Mus musculus E-value=3e-54; DNA excision repair protein ckn1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=5e-28; Uncharacterized WD repeat-containing protein alr3466 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) E-value=5e-17; |
| Length |
1841 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_JCVI-MT2 (3 ESTs); MT_ECELL (1 ESTs); MT_JCVI-MT1 (1 ESTs); MT_FLOSEED_MTY (1 ESTs); MT_SEEDROOT_KV3 (1 ESTs); MT_BML (1 ESTs); |
| Sequence |
GCCCATTTGAGTCCACTTGAGTTCCAGGAGTGAAGGAGGAGGAAGAAGACGACTTTGGTT
GTGGCCGTAGTATCACCACTCACCAGAGATAGCAACAACCTTTGTTACTGATTGAAATTG
AAATCGAACTCCAAAAATTCAAAGATGCTCCGAATATGGATACGTGGAAGAACATCAAAG
ACAGAGAATCCGGAAAATTGCGTCCAAATTCCTTCGCTAATCGCATAAAATCAAATCGAA
TTTCACAACTCGAGTTATCAAATCACAAAGAACTCGTTTCCCCTCACAAAGGTTCCATTA
ATTCCCTTCAAATTGATTTAACTGAAGGAAGATATTTGTTATCTGCTGCATCAGATGCAT
CCGTAGCGGTTTACGACGTTCACCGGCCAAGCGATTTCAACGGAGATGGTTTGATAACGA
AACACAATTGTTTATTTTTTGTTGATAAGCAACACCAATTAGCTCATAAATATGCTGTAT
CTTCAGCTATTTGGTATCCCATTGATACTGGTTTATTCATCACTGGTTCTTATGATCATC
ATGTTAATGTTTGGGACACTAACACCACTCAGGTGGTGGTGAATTTCAAAATGCCTGGAA
AGGTGTATAAGACTGCAATGTCTACATTGTCAACATCTCATACACTTATTGCTGCTGGAA
CTGAGGATGTACAAGTTCGTCTTTGTGATATTGCTTCTGGTGCATTTGCTCATACTTTGT
CTGGTCATCGTGATGGTGTAATGACTGTTGAATGGTCTGCTTCAAGTGAATGGGTCTTGA
TTACCGGGGGGTGTGATGGTGCAATACGTTTTTGGGACATAAGGCGTGCTGGTTGTTTCC
AAGTTTTAAATCAATCTCAGACGCGGCTTGGAAGACGTCCACCTCTACTCAAACGTTCCG
TGCTAACTAAGGAATCAAATACAAAAATGCGTCCTGTACAGAAGAAAGTTGCCAATGGAA
GTGGCAGTGGACATCTGCCAATTGGCAGGCTATCATCTAAGGGTCCAATGAAGCAGAAAT
TACATCCAGGAATGATTTCTACTCAGGATCGTGCAACTGCTCATTATGGTGCTGTGACAG
GATTGAAAGTAACAGAGGATGGCATGTATCTCTTAAGTGCAGGGTCTGATTCAAGATTGA
GATTGTGGGATGTTGAGTCAGGCTGCGACACACTTGTGAACTTTGAAACAGTCCGCTTGC
AAACAAGCAAACCTATTCAATTAGCTACAACTCAAGACTCGACCGTTGTTTTTGTTCCAT
GCATGAGGGTTGTGAAAGCATTTGATATGTGGTCTGGGAACGCACGTACGATACTACGTG
GACACTATGAGTCTGTAAACTCCTGCTGGTTTAATCAACAAGATCAGGAGTTGTACACAG
GTGGAAACGATAGACAAATTCTTGTATGGTCGCCTGCAAGGTCAATTGCTGATGAAATGG
GCGAAGGAGATCCCGACGACCAGGATAGCTGGAGTAACTGAGATTCACCTTCACTTGTGT
TTCACATATTTTCCTAATTTATAATTGGTGTGCAGTTTGTATTTTGCATGTTTGTGGGAT
GTGTAAATAAGGTTTGTTCTGGTTTTGGAGCAGATGTGAAACACGTAGGACATAACTGCA
GAGTTGTATACTAGTAGCTCATTGCCTTTGTAGATAGAATTAGTTTTCCCTTTCTCATCC
TGTAGACTTTGGCAATGTAAATATTACACGTTTGTTTCCTTTAATTTTTTTAGGGGGGTT
TCCTTTCTTTAATGTTTTTTCAAAATAAGGCTGTATACACATGTCTGTACCCAAAAAAAA
AAGATGTATACATATGTGCAATTTTAAATGACTTTGATACT
|
| EST members of Unigene |
BG448265 EV258972 DW016970 BG646017 GE351058 GE346261 GE346260 GD185178
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10570 DNA excision repair protein ERCC-8;
Genetic Information Processing > Replication and Repair > ko03420 Nucleotide excision repair > K10570 DNA excision repair protein ERCC-8 |
| EC |
|
| Transcription Factor Family |
|
| Transporter Classification Family |
3.A.2 H+- or Na+-translocating F-type, V-type and A-type ATPase superfamily F-ATPase |
| Probeset |
Mtr.30421.1.S1_at, Mtr.5829.1.S1_at
|
| Corresponding NCBI Gene |
839677
|
| Trichome-related Gene from Literature |
N/A
|