| Acc. |
TCMT47149 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
Thermospermine synthase ACAULIS5 OS=Arabidopsis thaliana E-value=0; Probable spermidine synthase OS=Sulfolobus tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) E-value=3e-53; Spermidine synthase OS=Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579) E-value=3e-52; Spermidine synthase OS=Thermus thermophilus (strain HB27 / ATCC BAA-163 / DSM 7039) E-value=3e-52; Probable spermidine synthase OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) E-value=1e-51; |
| Length |
1819 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_DSTEM2 (2 ESTs); MT_FLOSEED_MTY (2 ESTs); MTUS_MIXTISSUE (1 ESTs); MT_DROOT (1 ESTs); MT_ECELL (1 ESTs); MT_SEEDROOT_KV3 (1 ESTs); MT_DLEAF (1 ESTs); MT_JAS_ROOR (1 ESTs); |
| Sequence |
CAAAATCCGGAGGGTATACATTTAGAGATTATGAAAACAAATCAAAAAGATCCACGACAT
TGAACAAATTCCCAAGTAGGAACACCTGAGTTTTTTTCCCCCAAGTAGTTGTATATCTAT
GTAAAGTAACAGAGTCCACACATATGGATAGGATAGGGGACAAGCTCAATGAGGTAAGGT
CTTTCGACAGTACGATAAAGCCATCACAAAGTCCTTAGCCGAAGAGCCCACAGATGCCGG
TAACTTTTTCGATGTTGATGCTGTGCAGAACCACAGATCTACTAAGTTATGCAGTTGCAA
TGTTGGGAGCACAGATTGACCCCGGGCAGTGTGTAATGTATTGTACTTTACGAAAACCAA
TGAGGATTTTATTTTGCTTTTTTCAAGTCTGAAGCACTTCCACTTTGCTAGATTTCCTAG
CTATCAATAATTACTTCCCTTTCATTTCTCCTTCTTATATACGATCTCTCATTCTCATAT
CCATCCATAACATCACAAACTACTCTTTTCTCGTCTTCTTCTTCTTTCACACTTTCTCTT
GTTCTGTTCTTTTTAGTTGTCATCAAAGGAAAGATGGGTGAAGTAGCTTACACAAATGGA
AATGGAAATGACAAAAGCCATTCACCACCTAATGGTTATAGGAAGAGTTGTTGGTATGAA
GAAGAGATTGAAGAGAACCTTAGATGGTGCTTTGCTCTCAATAGCATCTTGCATACAGGA
GCTAGCCAGTACCAAGACATTGCATTGTTGGACACAAAGCCCTTTGGCAAGGCATTGGTA
CTCGATGGGAAGCTTCAGAGTGCAGAAACAGATGAATTTATCTACCATGAATGTCTTGTT
CATCCAGCTCTTCTTCACCATCCTATGCCAAAAAATGTTTTTATTATGGGAGGAGGAGAA
GGATCTACTGCAAGGGAACTTCTCAGGCACAAGACTATAGATAAAGTTGTAATGTGTGAC
ATTGATGAGGAGGTGGTGGAGTTTTGCAAATCATACTTAGTTGTAAACAAGGAAGCATTC
CATGACTCGAGACTTGAAGTCGTCATCAATGACGCAAAGGCTGAACTAGAAGGCAAAGAA
GAGAAGTATGATGTAATAGTTGGTGATTTGGCTGATCCAATAGAAGGAGGTCCTTGCTAT
AAACTTTACACCAAAGACTTCTATGAACTCACTCTTAAGCCAAAACTGAAGAAAGGTGGA
ATATTTGTGACACAGGCAGGGCCTGCTGGAATATTCAGCCACACAGAAGTTTTCTCATGT
ATTTACAACACCTTGAGACAAGTTTTCAAGTATGTGGTGCCTTATTCAGCTCATATCCCA
TCTTATGCTGATATTTGGGGATGGGTCCTGGCTTCAGAATCTCCATTGGACCTTAGTGCT
GAAGAATTAGATATCAGAATGAGACAGAGGATTATTGAAGAGAATAGATATCTTGATGGA
AAAACATTTGTGTCATCATCAACTTTGAGCAAAGCTGTTCGTAATTCGCTAAACAATGAA
ACTCATGTATACACAGAGGGAGCAGCTAGGTTCATATATGGTCATGGAAAGAATGCATAA
CTAAGCTTCAAATCATAACAAAAAGTAAAGCAAAAAGACACACAATGCAAGTTAACAAAT
GCTTTCAATCAAGATATTTCTTTCATTATATGTATTTCCTTTCTGCTCTTCACTTTTTTA
CCCCTTGGCTTGTACTTTCACCACTCAAAAAAAGGCTTGTAAGTGTTGCATCAATGAACA
ACCAATGGTTCCTATCTTGTGCTTCTATTTGGATATGCTCTCTTCCTATATACCACTACT
CTAATGTATTTAATTTAAG
|
| EST members of Unigene |
CA921569 BE320754 AW690604 AW693963 BF647169 DW017587 DW016677 AW775000 BF637011 CX533526
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Metabolism > Amino Acid Metabolism > ko00271 Methionine metabolism > K00797 spermidine synthase;
Metabolism > Amino Acid Metabolism > ko00220 Urea cycle and metabolism of amino groups > K00797 spermidine synthase;
Metabolism > Metabolism of Other Amino Acids > ko00410 beta-Alanine metabolism > K00797 spermidine synthase;
Metabolism > Metabolism of Other Amino Acids > ko00480 Glutathione metabolism > K00797 spermidine synthase |
| EC |
2.5.1.16 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.19268.1.S1_at, Mtr.42760.1.S1_at
|
| Corresponding NCBI Gene |
832073
|
| Trichome-related Gene from Literature |
N/A
|