| Acc. |
TCMT49799 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase SINAT3 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase SINAT5 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase SINAT4 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase SINAT2 OS=Arabidopsis thaliana E-value=0; Putative E3 ubiquitin-protein ligase SINAT1 OS=Arabidopsis thaliana E-value=0; |
| Length |
1485 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MT_CDS (4 ESTs); MT_JCVI-MT1 (4 ESTs); MT_Drought (3 ESTs); MT_ECELL (2 ESTs); MT_JCVI-MT2 (2 ESTs); MT_BML (1 ESTs); MT_DFLOWER (1 ESTs); MT_DLEAF (1 ESTs); MT_PhoLEAF (1 ESTs); |
| Sequence |
AGGACCTGTTCTTATTTCAAATTGACATAATCCTGATCTTGGTTAGGATTTGGATAATTA
TGTAATTAATTCCCTTGATAAATAATTTATTTATTTTATCATTGAGAAGAGAAGCCCCTT
TATTACCATGAAAAGGCCATAGCATATCCAACAACAATCGTGACAAATATCTCTCTCATT
ACATGTTCCATCTTAATCTTGGCTTCTCATTACTGTCTTCTTAACTCCACACTTTATAGC
TTTTGTTGCTGAAATCATGAAAACCGTTAGACATAAATCAAAGGGTCCTTAGTACTATTG
TATGATATCTCTCATATGATCAACCATTCATATCTCAGATTCCACTGTGATATATGCTTA
AAAATGGAAACAGGTGGAGTTGATAGTAGTATATTGTCATTGACTATGATGGAAGAGGCT
GAACATCATCACCATCAGTTTTCTTCAATCTCAAAGCTACTCAACAATGCTCCCACCACT
ACCAGTGTCCATGATCTTCTTGAATGTCCGGTTTGCACCAATTCAATGTACCCTCCAATC
CATCAGTGTCACAATGGACATACCCTTTGTTCAAATTGTAAGACAAGGGTACACAACAGA
TGTCCAACTTGCAGGCAAGAGCTAGGCGATATAAGGTGTTTAGCATTGGAGAAAATAGCA
GAATCACTTGAATTTCCTTGTAGATACATATCTCTTGGTTGTTCAGAGATATTTCCATAT
TTTAGCAAACTCAAACATGAGTCTATCTGTACCTTTAGACCATACAATTGCCCTTATGCT
GGATCAGACTGTTCTGTTGTTGGAAATATTCCATACCTTGTTGCCCATTTAAGGGATGAC
CATGGGGTTGATATGCATTCTGGATGCACTTTTAACCATCGTTATGTCAAATCAAATCCT
ACGGAAGTAGAAAATGCTACTTGGATGCTAACGGTTTTCCATTGTTTTGGTCAATATTTT
TGTCTCCATTTTGAAGCATTCCAGCTTGAAACGTCACCTGTTTACATGGCGTTTCTTCGA
TTCATGGGTGATGACAGAGACGCCAAGAACTACAGCTACAGCTTAGAAGTGGGAGGAAAT
GGACGTAAACTAACATTTGAAGGGAGTCCAAGAAGCATTAGAGATAGTCACAAGAAAGTG
AAGGATAGTCATGACGGCCTAATCATATACCGTAACATGGCACTTTTCTTCTCAGGTGGG
GATAGAAAAGAGTTGAAACTAAGAGTAACAGGAAGGATATGGAAAGAGCAGCAAAACTCT
GAATGCACACCCAACATGTGTAGCTAGGTTGTGCTATTTCTTATTGTAGATTACTAGATT
TTGGAAAGTCTTATCTAGTTATCTTGGTGTATGTTTTGTTAATGGTTATGGAGGTTTCAA
TTTACAAAACACACTTCCCTTCTCATGCCACTTTTCATTTCGTGTTCATAACAAGTAATA
CAAGCAAGAATCTTTACTTCTACAGCCAAAAAAAAAAAAAAAAAA
|
| EST members of Unigene |
BT051901 BT050725 BT050724 EU189946 BF645911 BF644937 EV258555 EV257912 EV257554 EV256914 BI273290 BG452188 BI264049 BE247858 BF635744 BE248929 GE351431 GE346953 GD185551
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K04506 E3 ubiquitin-protein ligase SIAH1;
Environmental Information Processing > Signal Transduction > ko04310 Wnt signaling pathway > K04506 E3 ubiquitin-protein ligase SIAH1 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.38247.1.S1_at
|
| Corresponding NCBI Gene |
825352
|
| Trichome-related Gene from Literature |
N/A
|