| Acc. |
TCMT53552 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase RNF34 OS=Pongo abelii E-value=1e-07; E3 ubiquitin-protein ligase RNF34 OS=Homo sapiens E-value=1e-07; Probable apoptosis inhibitor 2 OS=Autographa californica nuclear polyhedrosis virus E-value=1e-07; E3 ubiquitin-protein ligase RNF34 OS=Rattus norvegicus E-value=3e-07; E3 ubiquitin-protein ligase RNF34 OS=Mus musculus E-value=3e-07; |
| Length |
2068 nt |
| Species |
Medicago truncatula |
| Belonged EST Libraries |
MtBA (2 ESTs); MT_CDS (1 ESTs); MT_DSTEM2 (1 ESTs); MT_JCVI-MT1 (1 ESTs); MT_SEEDROOT_KV3 (1 ESTs); MT_JAS_ROOR (1 ESTs); |
| Sequence |
AAGTAATGAAGAAACGACAATGGTTTCTTTCATTCGGTGGCACAAGAATTTTAGGTCTGT
TTGTGTAATTAACGTTGACATAGATTGATTCTATTTGACTCTCTCTCTCAATTCAATCCA
TTAGATTAGCTTCGAAAATAGTACAAACAACAAACAAAGGAAACAAAGAACAAGGTTCAC
ACCCCTTTTTCTGTTTAATGTAACCGAAGAGAAGAAGAACACTAGTCGTAGATTTTCTGA
TAATTAACGTGTGTGTCACATAATTCCTCAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAA
GAAGAAGATGAGCTGGAGCAGGGTGTTGAAATCAGCGCAAGCTTTCGCTGCCCACACCTT
TCTCCTCTGTTTCACTCTTTTGCTCCTTCTCAAGCTTGATCATCGCATCTCTTCCTCTTG
GTGGATAATTTTTGCACCTCTTTGGATGTTCCACGGCGTTGTGGCTCGAGGAAGGTTTTC
ATTACCTGCGCCATCAGCTCCACGTAATAGACATTGGGCGCCATGTCACGCAGTTGTTGC
AATGCCATTACTTATTGCGTTTGAATTGCTCCTTTGTATATACCTTGAGAGCTTATATGT
TCGTGGCTTTGCAGCAGTAGATCTGAAGATTGTGTTCCTTCCTTTACTAACATTTGAAAT
CATTATTCTCATTGACAATTTCAGAATGTGTAAAGCTCTAATGCCAGGGGATGAAGAAAG
CATGAGTGACGAAGCAATATGGGAAACTCTTCCTCACTTTTGGGTTGCCATCTCTATGGT
GTTCTTCGTTGCTGCTACAGTTTTCACACTCCTAAAACTGAGTGGTAGTGTAGCTTCTCT
CGGTTGGTGGGACTTATTTATTAACTTCGCCATTGCCGAGTGCTTTGCATTTCTTGTATG
TACGAAGTGGTCCAATCCTGTCATTCATAGAAGTTCCAGAGAACCGAGTTCTTCTACTAC
TACAATTAGATATCTTGACTGGAACAGTGGTTTACTGGTTTCTTCAGAAGAAGATCAACG
TCAGGCGGGAATGTGTAGCCTCCAAGACATAGGGGGTCATTTCATGAAAGTACCGGTCAT
TGTTTTCCAGGTTCTTCTTTGCATGCATTTAGAGGGAACACCTGCTTTTGCTGCACATTT
ACCGCTTGCAGTTCTTTTCTCTCCCCTTTTCGTACTGCAAGGTGTTGGTGTGCTATTATC
TGCATCTAAGTTTGCGGAGAAACTTGTGCTTCTTCTACGAAGCGGAGCTGGTAGAGGACT
TTATTTTAGACTCTCTTCCAGAGCTCATGATTGCTCGGGATTCTTGCACCACGGTTCTAG
ATTACTAGGCTGGTGGTCAATTGATGAAGGTAGTCGGGAAGAACGGGCACGATTGTACCA
TGAGGGAGCATCTGGGTATAATGCATTCAGTGGTTACCCTCCTGAGATTGTTAAGAAAAT
GCCTAAAAGGGATCTTGCTGAGGAGGTATGGAGACTCCAGGCAGCTCTTGGCGAGCAGAC
AGAAATTACAAAATACAGCCAACAGGAATATGAAAGACTTAAAAATGAGAAAGTGCTGTG
CCGAATTTGTTTCGAGGGAGAGATTAGCGTTGTATTGCTCCCATGTAGACATCGTGTCCT
TTGCAACTTCTGCTCGGAGAAGTGTAAAGCGTGCCCAATTTGCCGCAACTACATTGCAGA
GCGCTTGCCTGTATATGATGTCTAAGCGTTAACTTGACCAACTTTTTTTATATACAACAA
GACCATAGAAGACAGTGTGACCAAAGGAAACTGAGAAAATGTTACATATAACAAGGTGAA
ATGGTGAATACTTGCTACAGTTTTTGTTGTCACGTTAATTATTCGCCAACTTATACATTG
TCTAATACACAACAAAGGGGTAGGAAGAATAGAGAAACCAGTTGGTTACTTTGGATTTTG
AATTTGATTTTGCTTTGCTTTAACTAATTTGTATATATAATAGATATTTAGAGTGTTTAT
AAATGATTGCAATCAATGTAATGAATAGTGATCTGCCCAACCTTTTTTTTCCGGGTCAAT
CATGTGTAAAAGCTTGGCTTCAATTCTT
|
| EST members of Unigene |
BT052419 AW697341 EV260155 BG645399 CX535042 AL371832 AL371831
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K04725 baculoviral IAP repeat-containing 2/3/4 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
|
| Probeset |
Mtr.31603.1.S1_at, Mtr.44352.1.S1_at
|
| Corresponding NCBI Gene |
838427
|
| Trichome-related Gene from Literature |
N/A
|