| Acc. |
TCNT57857 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana E-value=0; E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana E-value=5e-99; Probable E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens E-value=8e-72; Probable ubiquitin fusion degradation protein C12B10.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=2e-51; Ubiquitin fusion degradation protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) E-value=9e-47; |
| Length |
1649 nt |
| Species |
Nicotiana tabacum |
| Belonged EST Libraries |
NT_AGN_RNC (3 ESTs); NT_AGN_PNL (3 ESTs); NT_KR3B (1 ESTs); NT_MAT005 (1 ESTs); NT_SL (1 ESTs); LIBEST_023330 (1 ESTs); LIBEST_026714 (1 ESTs); |
| Sequence |
TATCTGCGAGAAGCAAAGTGAAAAAAGGCCACACTATGCCCTTACATGTATGTGGCACGA
CCTTAAAACGTCAAAATTGAAAGAACAATCTTCCTACATATTTACAAGCATTTGCAGCAT
AGAACCCCCCGCAGAAAAAATCTCCCATCATCACGGCCGGCCCCAATGTCAGCTTGGTGT
TGCTAGTTGAGCATGGGCCAGAGCCGCCTTTATTGAGGACCAGACACAACAATTTCACAG
TTGTATTCACAAGTCCATTTGTCAGGTGACTTATGATAAATCAAAGATCCTTGGCCTTCA
TTGATAGCATAGAGTAACTTTTTGTACATGATTTCCTTAGTAGAATAGGGAGGCAGTTTC
AGGTAGTTAGCACATGTCATCACACTAGGTAGGTCATCGTCTGCAGATTCTGACGGCATA
TTACCATTTGATGCTGTATTACTAGCACTAGATGAATGCTTCCTCACGATTGTCAGCTTA
GGATTGAGCACAGCCAGACCACCTGGAGGAAGCCGGGGAGCACCAGTGACAAACTGACAG
AACGCTCGTTGCTGCTCAGGAGTGAACTCTCCCATGATCTCTAGTAAATAAACAATAGCG
GGACTCTTGGCTGTATATCCATGATCAAATTTGATATGATCTACAAGCGTCTCAGCCTTC
CATAACTCTCTACGGCCACAAAGCAGTAGTCCAACTCAGTAGGAGAGAATGTTTGCAAAG
CTGAAATGTCAAATACTTGATTGAAGCCAGATCTAAATGCTTCCATCTGCCGCCCAATTC
CAGTCCTCACAGTGGCATCACACCAAAGAAACGTATCTCAAGTTACTAAGATCCACATTC
TGATCGCCTGCTTTCAGAACATATTCAGGATAGCCTGGGAGTGTGAAATCTAAACAAAGA
TCCTCAACTGGAGTCCCACGAAAATGCAAATCACTAATTTTGTCTTGGCCCAGGCCTCCC
ATTGATTCTATATATTGTTTCCGACTAACAAGAGCTTGCAACTCTTGCAAAGTCTTTCCC
AACTCAGCATCAAAAGAGAGAATATCATACAGATCAAGCTCTTGGCCAAGGACAAGTTTA
TAGAATGATGTTGACATAGGGAGGTCCAAAAGCCGCCCATCTTGAAGTGCTTTGGCCATC
ACACGCCCAAGCAATCTGAAATATTCTATTACCTTGGTGAATTGGTTTCCATCAGCGGTA
TCAACAGCCGATGGCCAGGGCCGTGGGAATAATCCAAGAGGTGCTTGGACAAGTTCTTTA
TCTTCCCCGTTCAATTTTTCATCCACGCCCACTTCCACTGAATGTTCACTTGATGAGGAA
CTAGTCCTCCACATTCCCAGTCCAACTTTTTGCAGATCATGACTTAAAAGGGTATAGAAC
TCCAGAGTTGGACCCAAACCAGTGCCAACTTCACCAAAATATTCAACCTCAAGAACAGCT
TTTTGGCTGGAGTACATCTCCATTACTTTCGCAGCAGAATCTAGAATGCGATTTCTAGAG
ACACGGACTTTCTGGCGCTGTAATCTCCCGACCCTAACTTCTCTCTCATTGGTAGATCCA
TTACCATCCGCACCTTGTTGTTGCTGAAGCCGGTATAAAGCCCTAGATAATCCGAACGCT
GTTGAATAGAAGTACTGGCGTCGAACCTC
|
| EST members of Unigene |
HO846144 BP531725 FG148921 FG183809 FG154386 FG190363 AM811721 FG148989 DW005029 FG183902 FG627125
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10590 E3 ubiquitin-protein ligase TRIP12 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
8.A.3 Cytoplasmic membrane-periplasmic auxiliary-1 protein MPA1 plus a cytoplasmic domain MPA1-C or MPA1+C |
| Probeset |
|
| Corresponding NCBI Gene |
830017
|
| Trichome-related Gene from Literature |
830017
|