| Acc. |
TCSH51812 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
MADS-box protein SVP OS=Arabidopsis thaliana E-value=3e-41; MADS-box protein JOINTLESS OS=Solanum lycopersicum E-value=2e-39; MADS-box protein AGL24 OS=Arabidopsis thaliana E-value=3e-36; MADS-box transcription factor 47 OS=Oryza sativa subsp. japonica E-value=4e-36; MADS-box transcription factor 22 OS=Oryza sativa subsp. japonica E-value=6e-32; |
| Length |
1349 nt |
| Species |
Solanum habrochaites |
| Belonged EST Libraries |
LIBEST_025268 (10 ESTs); SRR027941 (9 ESTs); LH__Ea (8 ESTs); SRR027940 (5 ESTs); LIBEST_025264 (1 ESTs); |
| Sequence |
TTGTTTTTTCTTTCTTCAGATCTCTTCTCCATTTCTTGCAAATTTCAGGTTGAAGCAAGG
AAATGGTGAGACAAAAAATTCAGATCAGGAAGATAGACAATTTGACAGCAAGACAAGTGA
CATTTTCAAAGAGAAGAAGAGGGCTTTTCAAAAAAGCTCAAGAGCTTTCAACTCTTTGTG
ATGCTGATATTGGACTCATTGTTTTCTCTGCTACTGGAAAACTTTTTGAGTATTCAAGCT
CCAGCATGATGCAACTGATTGAGAAGCACAAGATGCAGTCAGAAAGGGATAGTATGGATA
ATCCAGAACAACTGCATTCTTCTAACCTTCTGAGCGAGAAGAAAACCCATGCAATGCTTA
GCAGGGACTTTGTGGAGAAGAATCGGGAGTTAAGGCAACTACATGGAGAAGAGCTGCAAG
GACTTGGGTTGGATGAATTAATGAAATTGGAGAAATTAGTCGAGGGAGGAATAAGTCGTG
TCCTCAAAATTAAGGGTGACAAGTTTATGAAAGAGATCAGTTCCCTCAAGAAAAAGGAAG
CTAAACTCCAGGAAGAGAATTCACTGTTGAAAAAGCAATCACAAGCAAGATTGAATGAAG
GGCAAAATGTAATTGAGCAAGGACATTCAGCAGACTCCATCACCAACAATCGCAGCTTAG
TCAATGACTCAGATACTAGTCTCAAGTTATGCTTGGCTTTTCCTTAGTGAGCTCCATCCA
TATGAAAATGGGAGATAATATAGTTACTCAAACAAGGGCGAGTAATTTTCTAGTATTTAT
TATGGATCATAATATAGTGAAATGTATAAAATTGATTAGACTGGTTGACCAGGCCCCGTG
AAAAAACATTGGGACCATAGAGTTCATTGGGATTCGAAGGGTCAACGGTCTAATCAGAGA
GTCATGTGATATTTAGCTAGGTGCTATGTATTAATCTATTTAAAGAATCAACTTAAATAT
ATGTATTTATTAGCAGTAATTTCTTTGATTATTCAAGAAGCACCAATCTTTAATTAGAAT
TCATATCCAAAAAAAAAAAAAAAAAAAAAAAGGAACTTGCTGGGAATGCTGCGAGAGATA
ACAAGAAGAACAGGATTGTTCCGAGGCATATACAGCTTGCTGTGAGGAATGATGATGAAT
TGAGCAAGTTGTTGGGATCTGCTACTATTGCTAATGGTGGAGTTTTGCCTAATATTCATC
AGAATTTGCTTCCTAAGAAGATTGTTAAAGGGAAAGGTGAAATCAACTCTGTTTCACAGG
AGTTTTAGGTTTTGAGTTAAGAAGAATTGGGTTGGTACTTTTGATTTTTAGGGTTAATTA
GTTTGGGAGTTTTTTCGAATGTGAATTGC
|
| EST members of Unigene |
SRR027941.264152 SRR027941.142361 GT170902 GT160741 GT175402 GT179167 SRR027940.68335 GT178437 GT179208 GT170864 SRR027940.93664 GT175350 SRR027941.31344 GT168894 SRR027941.25750 SRR027941.109685 SRR027940.15364 SRR027941.97889 DN169170 DN169169 SRR027941.277214 DN169926 DN169925 GT169454 DN169918 DN169917 SRR027941.209216 SRR027940.23666 SRR027940.53978 SRR027941.110463 GT169408 DN170459 DN167568
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
|
| EC |
|
| Transcription Factor Family |
MIKC |
| Transporter Classification Family |
|
| Probeset |
|
| Corresponding NCBI Gene |
816787
|
| Trichome-related Gene from Literature |
816787
|