| Acc. |
TCSH52555 |
| Internal Acc. |
|
| Type |
TC/Unigene
|
| Annotation (Top 5 hits in Uniprot_trembl) |
E3 ubiquitin-protein ligase UPL3 OS=Arabidopsis thaliana E-value=1e-51; E3 ubiquitin-protein ligase UPL4 OS=Arabidopsis thaliana E-value=5e-41; Probable E3 ubiquitin-protein ligase TRIP12 OS=Homo sapiens E-value=1e-28; Probable ubiquitin fusion degradation protein C12B10.01c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) E-value=8e-26; Ubiquitin fusion degradation protein 4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) E-value=7e-24; |
| Length |
831 nt |
| Species |
Solanum habrochaites |
| Belonged EST Libraries |
SRR027941 (6 ESTs); LH__Ea (2 ESTs); LIBEST_025268 (2 ESTs); |
| Sequence |
GGGCCGTAGAGAGTTGTGGAAGCCTGAGACGTTAGTAGATCACATAAAATTCGATCATGG
ATTCACATCCAAGAGTCCTCCTATTATTCATTTACTAGAGATTATGGGAGAGTTCACACC
TGAGCAGCAACGAGCATTCTGCCAGTTTGTCACTGGTGCTCCTCGGCTCCCCGCAGGTGG
TCTTGCTTCTCTGAATCCTAAGTTGACAATTGTGAGGAAGCATTCATCTAGTGCTGGCAA
TGCAGCACACAACAGTAATGCCCCATCAGAATCTGCAGATGAAGACCTACCCAGTGTGAT
GACATGTGCTAATTACTTGAAACTCCCTCCCTATTCTACTAAGGAGATCATGTCCAAGAA
ATTACTCTATGCCATTAATGAAGGTCAAGGATCGTTTGATTTGTCATAAGTCGGAGTGAC
TAATAGACTTGTTTATACAACTCGAGAATTGGTGCTTCTGATCCTTGATAATGGTGCCGT
CAAACCACTCTCTTCAAACTGACAATAGCAAGTTTCACAGCTGACATGGAAGCATTGTTC
AAGATTTCTCCGGGGTTCTTTCTGTTGCTGTGAAGCTTGTTCCAAGTTTTCTGCAGGAGT
ACCTTTTTGTAAATGTTAGTAAATACGTAGCAAGATTCCTGTTTCATTTTTGATTTATTA
AGTTGGTGAAGTACATAAGTGTAAGGTCACAATGTTGCCTTCTTCCCTTTGCTTCTCTTA
GATTTAAAATTATAATCCTTTGGCATTTCACCTTATATTTAATACATTATAATAAATTCC
AACTAAAAAAAAAGAAAAAAAAACAAAACATGTCGGCCGCCTCGGTCTCTA
|
| EST members of Unigene |
SRR027941.195737 SRR027941.300890 SRR027941.316927 GT178940 SRR027941.309987 SRR027941.223916 DN170713 DN170714 GT178992 SRR027941.83395
|
| InterProScan Domain |
|
| Gene Ontology |
|
| KEGG Orthology |
Genetic Information Processing > Folding, Sorting and Degradation > ko04120 Ubiquitin mediated proteolysis > K10590 E3 ubiquitin-protein ligase TRIP12 |
| EC |
6.3.2.19 |
| Transcription Factor Family |
|
| Transporter Classification Family |
8.A.3 Cytoplasmic membrane-periplasmic auxiliary-1 protein MPA1 plus a cytoplasmic domain MPA1-C or MPA1+C |
| Probeset |
|
| Corresponding NCBI Gene |
830017
|
| Trichome-related Gene from Literature |
830017
|